Vanessa cardui (painted lady): 124535058
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Entry
124535058 CDS
T09161
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124535058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcd03021
]
124535058
03036 Chromosome and associated proteins [BR:
vcd03036
]
124535058
Transcription machinery [BR:
vcd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124535058
Coactivators
SAGA/TFTC/STAGA complex
124535058
Chromosome and associated proteins [BR:
vcd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
124535058
STAGA complex
124535058
TFTC complex
124535058
SAGA complex
124535058
SLIK complex
124535058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_1st
TFIID_NTD2
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_SPT8
ANAPC4_WD40
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_HPS5
WD_LRWD1
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Ge1_WD40
WD40_like
Motif
Other DBs
NCBI-GeneID:
124535058
NCBI-ProteinID:
XP_046967045
LinkDB
All DBs
Position
14:9119754..9124003
Genome browser
AA seq
650 aa
AA seq
DB search
MKRTRNDAVKAAVTSYLERRNYPEIDFFNNTNSSRSAEEMAVATIVQSEASRANSILFSC
INNDPGHYDVQYTRLVHFIKGIKIENVKNELLGLLTPLLCHLYLEMLRGGHGGAAQMFLK
RHSASLPQKDLSYHQPIDGNLPSALYRPNSLEQLFNSLQNGTIDNETPEKDYMNQLLDDI
GTVYTLQEVESRPSIAAFRSCKYDIYLSQDALNMLKAYLAKHGHVLLIQVLQTWFHIDIN
NDNRKNTDDDEDQTDDERNSVSVNCEKGNDSNDIFSKCNGHAEYQSVDKELRELQDAIKG
VRETMAPLKLYKIAAPDTHLVCAKTDQYCNVLCGGFDNSELRLWDLGQNNVKRKINRNIS
EIELACCIPPEPETPLDTTFQIGTGLPLRGHSGPVQAVSILSREELVLSASHDNTMRAWR
LSDYSCASIYRGHNYPIWCMDVSKNGLFIVTGSHDRTAKLWSLDRTFPVRVFVGHMSDVT
CVKFHPNEAYMATGGADRSVRLWSVCDARLVRVLVGHRAVVRALAFSPAGTHLASAGDDK
KIKIWDLAACTCVHEYRGHHGKVTALDWSAVGKPSLSNRISTDPNDSNADNSILCSAGMD
GVVKVVWDTNIKNKQVSSQDISTSTYNTKCSYLVDVQVHPDWMVAIGTKR
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggactcgaaacgatgcagttaaagctgctgttacttcctacttagaaagacgg
aattatcctgaaatagatttttttaataacaccaattcaagtcgcagtgccgaggaaatg
gctgtggcgactattgtacaaagtgaagcaagccgagcaaattctattttgttttcatgt
ataaacaacgaccccggacattatgatgttcaatacacaaggcttgttcatttcattaag
ggtattaaaatagaaaatgtgaaaaatgaattacttggtctgctgaccccattattatgc
catttatatctagaaatgttacgggggggacatggaggagctgcacaaatgttccttaaa
aggcattctgcctcattaccacaaaaggatttatcttatcatcagcctattgatggaaat
ctgccctcagcactttatcgtcctaatagcctagaacaattatttaattcattacaaaat
ggtactatagacaatgaaactccagaaaaagattatatgaatcaattactggatgatata
ggtactgtgtatacactacaagaagtggaatctcggccatccattgcagcttttaggtcc
tgtaaatatgacatttacttatcacaggatgccctaaacatgttgaaagcatatttggcc
aagcatggccatgttttattaatacaagttctgcagacttggtttcatatagatataaat
aatgacaatagaaaaaatactgatgacgatgaagatcaaactgatgatgagagaaattca
gtttctgtaaattgtgaaaaaggcaatgatagtaatgatatattttcaaaatgtaatggc
catgcagaatatcaatctgtggataaggaactacgagaactacaggatgctatcaaaggt
gtaagggaaactatggcaccgcttaagttgtataaaatagctgctccagatacacatcta
gtgtgtgcaaaaactgatcaatactgtaatgtgctatgtggaggatttgataattcagaa
ttaagattgtgggatcttggtcaaaacaatgttaagagaaagatcaacagaaatatatct
gagattgaactggcttgctgcattccacctgaaccggaaacacctttagacactacattt
caaataggaacaggattaccactaagaggacattcgggtccagtacaagcggttagcata
ctttctagagaagaactggtactttcagcctcccatgataatacaatgagggcatggaga
ttatcagattattcatgtgcttctatatacagaggtcataactatccgatctggtgcatg
gatgtgtcgaaaaatggattgtttatagtaaccgggtctcatgacagaacagcgaaattg
tggtctttggataggacatttcctgtacgagtgtttgtgggacacatgtctgatgtgacg
tgcgtcaagttccaccccaatgaggcatatatggcgacgggcggcgccgaccgcagcgtt
cggttatggagcgtctgcgacgcgcgtctcgtgcgcgtgcttgttggacaccgagctgtc
gttcgtgctctcgctttctcgcccgctggaacacatctcgccagtgccggcgatgataaa
aagataaaaatatgggatttagctgcatgtacatgtgtacatgaatacagggggcaccat
ggaaaagtaactgcactagattggtctgccgttggaaaacctagcttatctaacagaatt
tctacagaccccaatgattcaaatgctgataattctatattatgttctgctggcatggat
ggagtagtaaaagttgtatgggacacaaacattaaaaataagcaagtatcaagccaagat
atttcaacttctacatataatactaaatgctcatatttggttgatgtgcaagtacaccca
gactggatggtagcaataggaactaagagatga
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