Vanessa cardui (painted lady): 124535058
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Entry
124535058 CDS
T09161
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124535058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcd03021
]
124535058
03036 Chromosome and associated proteins [BR:
vcd03036
]
124535058
Transcription machinery [BR:
vcd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124535058
Coactivators
SAGA/TFTC/STAGA complex
124535058
Chromosome and associated proteins [BR:
vcd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
124535058
STAGA complex
124535058
TFTC complex
124535058
SAGA complex
124535058
SLIK complex
124535058
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
Beta-prop_THOC3
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
TFIID_NTD2
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_SPT8
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_Aladin
CFAP251_N
DSE1_N
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_HPS5
PAC11
WD_LRWD1
Beta-prop_EIPR1
Ge1_WD40
TRM82_WD
Motif
Other DBs
NCBI-GeneID:
124535058
NCBI-ProteinID:
XP_046967045
LinkDB
All DBs
Position
14:9119754..9124003
Genome browser
AA seq
650 aa
AA seq
DB search
MKRTRNDAVKAAVTSYLERRNYPEIDFFNNTNSSRSAEEMAVATIVQSEASRANSILFSC
INNDPGHYDVQYTRLVHFIKGIKIENVKNELLGLLTPLLCHLYLEMLRGGHGGAAQMFLK
RHSASLPQKDLSYHQPIDGNLPSALYRPNSLEQLFNSLQNGTIDNETPEKDYMNQLLDDI
GTVYTLQEVESRPSIAAFRSCKYDIYLSQDALNMLKAYLAKHGHVLLIQVLQTWFHIDIN
NDNRKNTDDDEDQTDDERNSVSVNCEKGNDSNDIFSKCNGHAEYQSVDKELRELQDAIKG
VRETMAPLKLYKIAAPDTHLVCAKTDQYCNVLCGGFDNSELRLWDLGQNNVKRKINRNIS
EIELACCIPPEPETPLDTTFQIGTGLPLRGHSGPVQAVSILSREELVLSASHDNTMRAWR
LSDYSCASIYRGHNYPIWCMDVSKNGLFIVTGSHDRTAKLWSLDRTFPVRVFVGHMSDVT
CVKFHPNEAYMATGGADRSVRLWSVCDARLVRVLVGHRAVVRALAFSPAGTHLASAGDDK
KIKIWDLAACTCVHEYRGHHGKVTALDWSAVGKPSLSNRISTDPNDSNADNSILCSAGMD
GVVKVVWDTNIKNKQVSSQDISTSTYNTKCSYLVDVQVHPDWMVAIGTKR
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggactcgaaacgatgcagttaaagctgctgttacttcctacttagaaagacgg
aattatcctgaaatagatttttttaataacaccaattcaagtcgcagtgccgaggaaatg
gctgtggcgactattgtacaaagtgaagcaagccgagcaaattctattttgttttcatgt
ataaacaacgaccccggacattatgatgttcaatacacaaggcttgttcatttcattaag
ggtattaaaatagaaaatgtgaaaaatgaattacttggtctgctgaccccattattatgc
catttatatctagaaatgttacgggggggacatggaggagctgcacaaatgttccttaaa
aggcattctgcctcattaccacaaaaggatttatcttatcatcagcctattgatggaaat
ctgccctcagcactttatcgtcctaatagcctagaacaattatttaattcattacaaaat
ggtactatagacaatgaaactccagaaaaagattatatgaatcaattactggatgatata
ggtactgtgtatacactacaagaagtggaatctcggccatccattgcagcttttaggtcc
tgtaaatatgacatttacttatcacaggatgccctaaacatgttgaaagcatatttggcc
aagcatggccatgttttattaatacaagttctgcagacttggtttcatatagatataaat
aatgacaatagaaaaaatactgatgacgatgaagatcaaactgatgatgagagaaattca
gtttctgtaaattgtgaaaaaggcaatgatagtaatgatatattttcaaaatgtaatggc
catgcagaatatcaatctgtggataaggaactacgagaactacaggatgctatcaaaggt
gtaagggaaactatggcaccgcttaagttgtataaaatagctgctccagatacacatcta
gtgtgtgcaaaaactgatcaatactgtaatgtgctatgtggaggatttgataattcagaa
ttaagattgtgggatcttggtcaaaacaatgttaagagaaagatcaacagaaatatatct
gagattgaactggcttgctgcattccacctgaaccggaaacacctttagacactacattt
caaataggaacaggattaccactaagaggacattcgggtccagtacaagcggttagcata
ctttctagagaagaactggtactttcagcctcccatgataatacaatgagggcatggaga
ttatcagattattcatgtgcttctatatacagaggtcataactatccgatctggtgcatg
gatgtgtcgaaaaatggattgtttatagtaaccgggtctcatgacagaacagcgaaattg
tggtctttggataggacatttcctgtacgagtgtttgtgggacacatgtctgatgtgacg
tgcgtcaagttccaccccaatgaggcatatatggcgacgggcggcgccgaccgcagcgtt
cggttatggagcgtctgcgacgcgcgtctcgtgcgcgtgcttgttggacaccgagctgtc
gttcgtgctctcgctttctcgcccgctggaacacatctcgccagtgccggcgatgataaa
aagataaaaatatgggatttagctgcatgtacatgtgtacatgaatacagggggcaccat
ggaaaagtaactgcactagattggtctgccgttggaaaacctagcttatctaacagaatt
tctacagaccccaatgattcaaatgctgataattctatattatgttctgctggcatggat
ggagtagtaaaagttgtatgggacacaaacattaaaaataagcaagtatcaagccaagat
atttcaacttctacatataatactaaatgctcatatttggttgatgtgcaagtacaccca
gactggatggtagcaataggaactaagagatga
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