Vanessa cardui (painted lady): 124535262
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Entry
124535262 CDS
T09161
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124535262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcd03019
]
124535262
Messenger RNA biogenesis [BR:
vcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124535262
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
124535262
NCBI-ProteinID:
XP_046967356
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Position
14:complement(8499545..8501528)
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AA seq
565 aa
AA seq
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METKSEIFSQRLVKAVVWNITLQISLAIVLVFFIQVDLIHPISWITSTFNDIFSWKMALN
AILLGLVSFFQAYLYGSYFSVPVPKYFTRFSMFLNIFSVQNIIFSTLYALNGYFTMSLYS
SLAKSNFNILKKKCDTYDGQCLAEQSLFLQFGGMWMGLYYFTTAHLFSATVLTFPHIYQE
KFQQIKLVISNIVAMGFQHSVTPVIYYCIFYYVWGNKPRNVVSEVYSLYLEDPPLDNIFN
LISSGIWIGLWFYTSLYFISIYTMKTVFNIVLTEPMKFPIEGDNQFTLNNALSQRLQFTG
YLGAQDLKYMSLMDYARRSQIFTLSQPGGHPRNWNNLLEKCLQMINQFNSELDKINNDSH
SVEAENTNSRKTFNAIAPVTPPSVYSRSLRNMAQSPHLLELKDHNKNEVDDTFATAMKLE
FKNFLVKLSQKPGINYFFGELVDTKLKFILIQAQPVIWTCEGLAYIVSASLKEDKYGVVQ
NDLPIVLSTLIYLKQNLDKLTKAGLVPRKHILNDVLAVKIRNALLSSVKRSLYKIIMTFS
KFIHEIPLEPDVQIAVQSFLSCKEA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaaaagtgaaatattttcgcagcgtttagtaaaggcagtagtatggaatata
actttacaaatttctcttgccattgttttagtgttttttattcaagtcgatttaattcac
ccgatatcatggataacttctacatttaatgatatttttagctggaaaatggcattaaat
gctatactcctcggactagtatcattctttcaagcatatttatatgggagttatttctcg
gttcctgtaccaaaatactttacaagattctcaatgtttttaaatattttttctgtacaa
aacattatattcagcactctttatgctctgaatggttatttcactatgagtttatattct
tcattggctaaaagcaactttaatatcttgaagaagaagtgtgacacttatgatgggcaa
tgcctggcagaacaaagtctatttctgcaatttggaggaatgtggatgggattgtactac
tttactactgcccacttgtttagtgctacagtactgacatttcctcatatttatcaggaa
aaatttcagcagattaaacttgtgataagtaatatagtggcaatgggatttcaacattct
gtaacaccggtaatatactattgcattttttactatgtatggggtaataagcctagaaat
gtggtgtctgaggtgtacagtttatatttggaagaccctccactggataatatttttaat
ttaataagttccggtatttggattggactatggttttatacaagtttatattttatttca
atatacaccatgaaaacagtttttaacatagtattaacagaaccaatgaagttcccaatt
gaaggtgataaccagttcacattaaacaatgctctatcacaaagattacaatttactggt
tatttgggtgctcaagacttaaaatacatgtcacttatggattatgctagacgctcacaa
atttttactctatcccaacccggtggccatccaagaaactggaataacttgctggagaaa
tgtctgcaaatgattaatcaatttaatagtgagttagacaaaattaataatgattctcat
tcagttgaagctgaaaatacaaacagtagaaaaacttttaatgcaatcgctccagtaaca
ccaccttctgtttactcaagatcattaagaaatatggctcaatcaccacatttactggag
ctgaaagatcacaacaaaaatgaggtggatgatacttttgctactgctatgaaattggaa
tttaaaaatttccttgttaaactttctcaaaaacctggcatcaattatttttttggagaa
cttgtcgacactaagctgaaatttattcttattcaagcacagccagttatatggacatgc
gaaggtttagcctatatcgtatcagcgtcattaaaggaagacaaatatggtgttgtacaa
aatgacttacctatagttttatcaactttaatttatcttaagcaaaatttagacaaacta
acaaaagctggtcttgtacctagaaaacatattttaaatgatgttcttgcagttaaaatt
agaaatgctctcctgtcatcagtaaaaagaagtttgtataaaattataatgacattttca
aagtttattcatgagatcccattagagcctgatgttcaaattgctgttcaatcattttta
tcatgtaaggaggcataa
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