Vanessa cardui (painted lady): 124535289
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Entry
124535289 CDS
T09161
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd04140
Autophagy - animal
vcd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124535289
04148 Efferocytosis
124535289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcd04131
]
124535289
Membrane trafficking [BR:
vcd04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124535289
Hops complex
124535289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
124535289
NCBI-ProteinID:
XP_046967417
LinkDB
All DBs
Position
14:11342026..11354474
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AA seq
835 aa
AA seq
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MSALLTADWFQLDSYYRKFDLYNMVWSMDEGLGNMIVSGAPYGGPIAVVRDRKQFVRIMT
TSKPVITIYNGVGNIISKILWNNGVLVHMGWSDGEQLLCVQESGDVLIYDMFGAYQKTFS
MGQEARDTKVCKAQLFSNPHGIGLAVMTTTNRMFLVSNVSEPKVRPVPDVPRANEPITCW
CVLSSGLRSSAVIGFLVCRDKEVYRCQLGESRPLLMRPEISNAYTQILTIVPSQNGRHVA
LFTDSGILWIGSSEFKSKYCEIDTGYIKQPKELVWCGSQAIIGHWDDTMCIYGFNGTTVS
YPYDGPFHLIPEMDCVRIISEMTHELIQKVPVVVEKIFRINSTAPGSYLVEASKQFQRRS
HRADEYIRLVKPDLASAVQDCVDAAAFEFCPAVQKQLARAAQFGKGFLGDAALTEHYVRT
CRWLRVLNAVRDPRVAVPLTYLQVQNLGERILLDRLIWRRLHCLAGHIASYLQLKDGQTR
VLSHWACYKVTQPHLDNESAAREIGEKLRNIPGISYSTIAMKAAEKGRKTLAIKILEYET
RSKLQVPLLLALGEGPTALLKATASGDTDLVYIVLLHLKEKMGKHEFELTIRSFPLAHAL
YIKYCASHNREALRAVFVQEDEFAAQAATHVRDALAPPAPGSAEASLLSARECYRKARHD
LGVAICEEARKLCKQQSSLQETYGESFVGLSLQDTVKKLLNQGEVKLADKLRSEYKMPDR
RYWWLRILTLAEKDEWAQLEVFSKSKKSPVGYEPFVDACLKYGKNDEALNYLPKCRDDIK
VKYYVKAGFYEEAAQVAFDQKDESALFFVQNKCPVRESSKHAKIQALLDQLTTKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgttattaaccgcggattggtttcaactggattcatattacaggaaatttgac
ctgtataatatggtctggtctatggacgaaggcttaggcaacatgattgtaagtggtgct
ccatatgggggtccaattgctgtcgtgagagacagaaaacaatttgttcgtattatgaca
acatccaaaccagtcattactatttataatggtgttggaaatatcatatcaaaaattttg
tggaataatggtgtgcttgtgcacatgggatggtcggatggggaacagttgctgtgtgtg
caagagagtggagatgttcttatctatgacatgtttggtgcttatcaaaaaacttttagc
atgggacaagaagcaagagatacaaaggtctgtaaggcacaattattctcaaaccctcat
gggatcggtctggctgttatgactacaacaaatcgcatgttcctagtgagtaatgtatct
gaaccaaaagtaagacctgtgccggatgtgccaagagccaatgaaccgataacatgttgg
tgtgttctgagtagtggtctgcgatcttcagctgttataggattccttgtatgcagagac
aaagaggtctatagatgtcaacttggtgaatcaagaccccttcttatgcgacctgaaata
agtaacgcttacacgcaaatcctaacaatagtgccctcacaaaatggacgtcatgtcgcc
ctattcactgattctggtattttatggattggttcatcggaattcaagagcaaatactgt
gaaatcgataccgggtatatcaaacaacccaaagaattagtttggtgtggttcccaagct
ataataggccattgggatgacacgatgtgtatctacggcttcaacggtaccacggtctcg
tacccgtacgacgggcccttccacctcataccagagatggactgcgttcggatcatttcg
gaaatgacacacgaacttatacaaaaagtaccggtcgttgttgaaaaaatattcaggata
aatagtacggcgcccgggtcgtacttagtggaggcctccaagcaatttcagagacgcagc
caccgcgccgacgagtacatccgtctggtgaagcccgacctggcgagcgccgtgcaggac
tgcgtggacgcggcggcgttcgagttctgccccgccgtgcagaagcagctggcgcgcgcg
gcgcagttcggcaagggcttcctcggcgacgccgcgctcaccgagcactacgtgcgcacg
tgccgctggttgcgcgtgctcaacgccgtgcgcgacccgcgcgtcgccgtgccgctcacc
tacctgcaagttcaaaatctaggcgagagaattttactagacaggctcatatggcggcgc
ttgcactgcctcgcgggacacatcgcgtcctacctgcagctcaaagacggacagacgaga
gtattgtcacattgggcctgttataaggtaacacagccgcacctggacaacgaaagtgcc
gctcgagagattggcgaaaaactaagaaacattcctggtatatcctactcaacgattgct
atgaaagctgcagagaagggacgaaagacgctagctattaagatattagaatacgaaacc
cgaagtaaacttcaagttcccctgctattggccctcggagagggccctactgcgctgttg
aaagctacagctagcggcgatacggacttggtctatatagtattgttgcatttgaaggaa
aagatgggaaaacatgaatttgaactgaccatccgcagcttcccgctggcgcacgcgctg
tacatcaagtactgcgcgagccacaaccgcgaggcgttgcgcgccgtgttcgtgcaggag
gacgagttcgcggcgcaggcggccacgcacgtgcgcgacgcgctcgcgccgcccgcgccc
ggcagcgccgaggcctcgctgctctccgcgcgcgagtgctaccgcaaggcgcgacacgac
ctcggcgtagcaatttgtgaagaagcgaggaaattatgcaaacagcagtccagtctccag
gaaacttacggcgaaagtttcgtgggtctctccttgcaggataccgtaaaaaaacttcta
aatcaaggcgaagttaaattggctgataaactacgatctgaatacaaaatgcccgacaga
agatattggtggctacgaatactgaccttagccgaaaaagatgaatgggcacagttagaa
gtattttcaaaatcaaagaaatctcccgtcggctacgagcccttcgtcgacgcctgtctc
aaatacggcaagaacgacgaagctcttaactatttaccgaaatgcagggacgacatcaag
gtcaaatattacgtaaaggccgggttctatgaagaagcagcacaagtggcctttgatcag
aaagacgagagcgctttatttttcgtccagaacaagtgtccggttcgggagtccagcaag
cacgccaaaattcaagccctcttggaccaacttacaaccaaaaagtag
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