Vanessa cardui (painted lady): 124535387
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Entry
124535387 CDS
T09161
Symbol
LOC124535387
Name
(RefSeq) uncharacterized protein LOC124535387
KO
K19719
collagen type II alpha
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd04512
ECM-receptor interaction
vcd04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124535387 (LOC124535387)
04518 Integrin signaling
124535387 (LOC124535387)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
vcd00536
]
124535387 (LOC124535387)
Glycosaminoglycan binding proteins [BR:
vcd00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124535387 (LOC124535387)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
NELL_VWC_C
PSP94
Motif
Other DBs
NCBI-GeneID:
124535387
NCBI-ProteinID:
XP_082789401
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All DBs
Position
14:3191116..3204909
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AA seq
1495 aa
AA seq
DB search
MWQAKLACLALLVLPAVAKDLADNKEEELPQAQESDLINYDDYNPFGEDENAIIAERDFR
GSTTATPAYRRPLPQVNRAPISRCLDMGRSFTDGETWKRDNCTLCQCYSSRVNCSVLPSC
LSTPTTSRPLPPPPPAVAAQPTVPVRGYSGEPGVDGPPGPPGVPGVNGVPGSPGIPGPVG
PMPDVNAYLAQLAAAAGGDKGPAFDPYHYMQASVGSPGIRGIPGPQGPPGPQGFQGPRGE
PGEPGLAGQPGPPGERGPQGLPGKDGSPGEDGEPGPVGVAGQPGPRGIPGVPGLQGLKGH
RGFDGKDGAKGEQGLPGEKGPTGLPGQMGPAGPIGPVGPRGERGREGPPGTPGMRGVDGA
PGPPGLMGNVGKTGSPGFPGSPGLKGEQGLSGPKGSQGMQGPRGEPGRPGQPGEVGPTGL
AGRDGIPGEKGIQGQAGAAGPQGFPGPRGTPGVAGDPGIPGAKGMPGQPGERGTKGDSGI
RGETGSPGPRGLPGSIGPEGKRGKRGLRGPAGNVGPQGERGLQGLRGLPGIDGPSGMKGQ
AGDRGSVGLPGPKGSTGDAGRPGPQGLPGARGVMGRPGITGKSGPPGERGIPGADGRPGE
QGLQGLQGPPGLIGSPGERGLQGEPGKDGEIGQPGPVGPKGDAGRDGSPGVQGPQGPVGA
TGERGPTGPPGPTGFPGMPGSAGLPGSAGKDGEPGVSGPAGPPGPIGPRGERGFSGERGM
PGPPGTSGEKGETGAQGLDGLPGPEGPRGSKGHPGPIGAMGMPGPRGLTGFAGEKGDRGS
AGPQGPEGPQGRQGEQGPQGPVGPTGPPGEPAERGEPGTPGLPGEPGAPGSTGDRGQPGV
QGNPGLSGPPGLTGMPGLKGDRGYAGAKGQQGAPGNPGLSGEPGQRGLPGQVGAKGARGD
QGAKGDIGHTGLQGRPGELGPPGPQGSPGATGSPGIPGAKGATGDTGRSGPPGLQGLTGP
QGPEGAKGERGSEGEIGPHGPPGTPGSPGERGPSGLQGMIGAPGPQGLRGIQGESGMPGK
PGADGAPGPIGAPGLQGPAGPMGEPGPEGRPGKLGQPGIPGRPGDKGPIGQPGQSGPPGP
PGLQGSPGSSGPPGPTGERGPRGESGPPGVDGPQGPAGKQGLPGMDGLKGERGEAGADGA
KGHAGIPGLPGMVGAPGRAGDRGLPGSIGPPGKDGDPGPRGPPGRDGSPGPLGPSGPPGG
RGSPGEPGRHGTPGPAGPPGPPGPPGEGLAYDAAAIAAMLQQGSIKGPDPLGDDPNSMPP
RFFKDDMSPEERKKIVMKAYERLKVSLDKFLKPDGSKEAPAKTCGDIKYHHPEFTSGQYW
IDPNGGDYNDAILVHCDMETGASCVFPKPIMSDDLTHTGRNEAWLSEIDNGFTISYKADN
SQLTYLQLLSMRAVQNVTLHCRNTVGYYDPATRNYKHGLKLLAFNDAEILPKANNRLRYK
ALLDECQHKKQEWAKTILQYETDKPGRLPLLDVAVRDVGRHEQMFRIEMGLACFS
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaggcgaaactcgcttgtctggcactgctggtgctgccagctgttgccaaggac
ctagcagacaacaaagaagaggaactgcctcaagctcaagaatccgatctcataaactac
gatgattataatccatttggagaagatgaaaatgctattattgccgaacgggacttcaga
ggatcaacaactgcgactcctgcttatcgacgaccattgccacaagtaaatagagctcca
ataagccggtgcttggatatgggacggtcattcacggacggtgaaacttggaagagagac
aattgcactctatgccagtgttatagcagccgtgttaattgttccgttctaccatcttgt
ctttcaacaccaactacaagtcgacctcttccaccaccaccaccagccgtagctgctcaa
ccaacagttccagttagaggatattcaggggaaccgggtgttgatggcccgcccggcccg
ccaggtgtacccggagtaaacggcgtacctggtagccctgggataccaggacctgttgga
cccatgcccgatgtgaatgcatacctagcgcagttagcagctgctgctggcggggataag
ggccccgcgttcgacccgtaccattacatgcaggcttctgtaggttctccgggaattaga
ggaataccaggtccacaaggtccacctggacctcaaggttttcaaggtccaagaggagaa
cccggtgaacctgggctagcgggacaaccgggtcctcctggagaaagaggaccacaaggg
ttaccaggaaaagatggctctcctggagaagatggagaacctggtccagtaggagtggcc
ggacagccgggtccacgtggtattccgggagtaccaggacttcaaggattaaagggacat
cgtggtttcgatggaaaagacggcgcgaagggtgaacaagggctacccggagaaaagggt
ccaactggtttacctggacaaatgggtccagcgggacctatcggtcccgtaggaccaagg
ggtgaaagaggacgagaagggccacctggtactccgggcatgcgtggagttgatggagca
cctggaccaccaggtcttatgggtaacgttggaaaaactggttctcctggttttcctgga
tcacctggattgaaaggcgaacaaggacttagtggacccaaaggcagtcagggtatgcaa
ggcccacgtggtgaacccggacgccctggacaacccggggaagtaggtccaactggatta
gcggggcgagacggaatacccggtgagaaaggaattcaagggcaagctggtgctgcagga
cctcaaggttttccaggaccaagaggtacccctggagttgctggcgatcccggaatacca
ggggctaaaggcatgccgggacaaccaggggagaggggaacgaaaggtgactcaggtata
agaggagaaactggatctccaggaccaaggggtttaccaggaagtattggaccagaagga
aaaagaggaaaacgtggtttacgtggaccagccggaaatgtaggtccacaaggtgaaaga
ggcttacaagggctcagaggattacctggtatcgacggtccttcgggtatgaaaggtcag
gcaggcgatagagggagcgttggtcttccaggacctaaaggtagtactggcgatgccgga
agacctggtcctcagggactcccaggagcaagaggcgtaatgggtagaccaggaataact
ggaaagtcgggacctcctggtgaaagaggtatacctggtgctgatggaaggcctggcgaa
cagggattacagggcttacaaggaccacctggcttgataggtagcccgggagaaagagga
ttgcagggcgagccaggtaaagatggtgaaattggtcagcctgggcccgtaggacctaaa
ggagatgcagggcgagatggtagccctggcgttcaaggcccacaaggtcctgtaggtgct
acaggtgaacgaggtcctacaggcccacctggacccactggttttcctggtatgccagga
tccgccggattaccaggatctgctggaaaagatggtgagccaggtgtctccggtcctgct
ggacctcccggccctattggaccacgtggcgaaagaggtttttcgggcgagagaggtatg
cctggtccacctggtacatctggtgaaaagggagaaactggagctcaaggtcttgatgga
ctaccgggccctgaaggaccaagagggagtaaaggtcatcccgggccaattggtgcaatg
ggaatgcctggaccacgtggtttaactggtttcgctggtgagaagggagatagaggatca
gctggtccacaaggccccgagggaccgcaaggtcgccagggtgaacaaggaccacagggc
cctgtcggaccaaccggaccaccaggggaaccagctgagagaggtgagcccggaactcca
ggattaccaggagaacccggtgcacccggttcaacgggagatcgtggtcagcctggagta
caaggaaacccagggttatctggaccgccaggtcttactggcatgcctggattaaagggt
gatcgaggctatgcaggtgctaaaggtcagcaaggagctcccggaaatccaggtttatct
ggagaacctggtcagagagggttacctggccaagtaggagccaaaggggcacgaggtgac
cagggtgctaagggagatataggacatactggattgcaaggaagaccaggagagttaggt
ccaccaggtccacaaggtagcccaggagcaacgggttcacccggtattccaggtgctaaa
ggtgcaactggtgatactggaagatcaggtcctcctggacttcaagggctaactggacca
cagggacctgagggagctaagggtgaaagaggtagtgaaggagagattgggccgcatgga
ccgcctggtactccgggatcacctggagaacggggtccaagtggtttacagggaatgatt
ggggctcctggacctcagggactaaggggcatacagggtgaaagtggtatgcccgggaaa
cctggtgctgatggggcacctggacctattggagcacctggacttcaaggacctgcagga
cctatgggagagccgggaccagaaggccgcccaggaaaacttggtcagcctggtataccg
ggacgaccaggagacaagggaccgatcggacaaccaggacaatcaggcccacctggtcca
ccaggattacagggttcacctggatcatctggtccccctggccccactggagaaagagga
cctagaggtgaatctggaccaccaggtgtcgatggaccccagggtcctgctggaaaacaa
gggcttcctggtatggatggtctaaagggtgaacgtggtgaagctggagcggatggcgca
aagggtcatgcaggtatacctggcctaccaggtatggtaggagcccctgggcgagctggt
gacagaggtcttccaggatcaattggaccacctggaaaagatggagacccgggaccaaga
ggtccacctggtcgtgacggtagtcctgggcctcttggtccaagtggtccacctggtggt
cgaggatctccaggagaacctggacgtcatggcaccccaggacctgctggtccacctggc
ccgcccggtcctcccggagaaggtttagcttatgatgctgctgctatcgctgctatgtta
caacaaggatcgatcaaaggaccggacccattaggcgacgatcccaacagtatgccaccc
cgtttcttcaaagatgacatgagcccagaagagagaaagaaaattgtaatgaaagcatac
gaaagacttaaagtatccctcgataaatttttaaagcccgacggttcgaaagaagctccg
gcgaaaacatgcggtgatattaagtaccaccatcctgaattcacgagtggtcagtactgg
attgatcccaacggtggggactacaacgacgctatattggtgcattgtgatatggaaact
ggtgccagctgcgtgttccccaaaccgattatgtcagatgatctcacgcatactggcagg
aatgaagcatggcttagcgaaatcgataacggatttacgatttcttacaaagccgataac
agtcagctaacatacctccagcttctgtccatgagagcagttcagaacgtgacgctacac
tgtcggaacaccgtcggatattacgacccagcgaccagaaattataagcacggattgaaa
ttacttgcgttcaacgacgccgagattctaccaaaagctaacaacaggcttagatataag
gctttattggatgaatgtcagcataagaagcaagaatgggcgaagacgatattgcaatac
gaaacggacaagcccgggcgtctgccgctattggacgtcgctgtacgagacgtcggcaga
cacgaacaaatgttcaggatcgagatgggccttgcctgttttagttaa
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