Vanessa cardui (painted lady): 124535497
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Entry
124535497 CDS
T09161
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124535497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcd03009
]
124535497
Ribosome biogenesis [BR:
vcd03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124535497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
AAA_16
RuvB_N
TIP49
AAA_5
AAA_22
AAA_33
AAA_14
Vps4_C
nSTAND3
RNA_helicase
AAA_28
NPHP3_N
Mg_chelatase
AAA_18
AAA_17
AAA_2
IstB_IS21
AAA_7
ABC_tran
TsaE
AAA_3
ATPase
Rad17
Parvo_NS1
Zeta_toxin
NB-ARC
AAA_11
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
124535497
NCBI-ProteinID:
XP_046967658
LinkDB
All DBs
Position
15:complement(2980441..2983592)
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AA seq
870 aa
AA seq
DB search
MKKHQTRQKTLNDPVIVSRVKNYLAENVDKTFVDVSQMARSLKERYREYSNRSDNAFCQM
VESAYKVVLQSYGLDGASTSEGSEEESDLELLDENNSALNDRLLAMYKMQDKKRAPASRR
ATDKSGEPIDILSSDEDGSAAPKIPKINDQITITPHIPSRNANSTAVESIVRPQQIINTT
DKKRKLDSNKNALPKKKTEFGSVKNVKVSFEDVGGISDLITQICDLVLHMKHPEVYTQLG
IKSPRGALLHGPPGTGKTLIAHAIAGKLEIPLIAVTGTELVGGVSGESEERIRELFDRAV
SVAPCVLFIDEIDAVCGNRIHAQKDMEKRMVAQLLASLDSLNENIASVLILAATNNPDAL
DPALRRAGRLEQEITLGIPSLKARKEILSILCKNLALADDVDMNALAQITPGFVGADLQA
LVNKASTYAVKRIFAEIRIKNKLETLKKTEETKINSEEVNVIPNGDGSSEECVKEPDEPV
ESTTEPPPQTDSTEVTPQETNENGSGLTNHVVEEPISIPTQLDPVDEVLCLLENNIPYTP
EELTGLAISYDDFVKALKTTKPCAVREGIVTVPDVTWDDVGSLNQVRKDLQLAVLAPVKY
PEQLKKLGLSAPSGVLLCGPPGCGKTLLAKAVANEAGVNFISVKGPELLNMYVGESERAV
RTCFRRARNSAPCVIFFDEFDALCPRRSSHDNNGAARVVNQLLTEMDGIESREGVFVLAA
SNRPDIIDPAVLRPGRLDRIMYVGMPATEDRFDILKKLTKSGTKPQLGPDVDLQVIADLT
EGYTGADLSGLVRAAATNSLTNHIANGTLEGEIFVSFEDFRAALSKCKPSVSSKEQLHYE
KLRLKYAGGIDEKEMEMETELTNEESMDTV
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacatcaaacaagacaaaaaactttaaatgacccggttattgtttcacgggtc
aaaaattatctagccgaaaacgtggataagacatttgtcgatgttagtcaaatggcgcgt
tctctgaaagagcgctatcgcgaatacagcaacagaagcgacaacgctttttgtcaaatg
gtcgaaagtgcttataaagtagtgttacaaagctacggactggatggtgcgtctacgtct
gaaggttcagaagaagaatcagacttggagttattagacgaaaacaatagtgcgcttaat
gatcggttattagcaatgtacaaaatgcaggataaaaagcgggcgccggcctcccgcaga
gctactgacaagtcaggtgaacctatcgatatactcagtagtgatgaggatggcagtgcc
gcgccaaaaataccgaaaatcaatgatcaaataacaatcacaccccatataccgtcgaga
aatgcgaatagtacagctgtcgaaagtatagtgaggccacaacaaattataaatacaaca
gataaaaagcgaaaattagactcaaataaaaatgcactaccaaagaaaaagaccgaattt
ggttctgttaaaaatgttaaggttagctttgaagatgttggtggtatatcagatttaatt
acacaaatctgtgatcttgtcctacacatgaaacatcctgaagtttacactcagttagga
ataaaatcacctagaggtgccttactacatggccctccaggtactggaaaaacattaata
gctcatgcaatagccggcaaacttgaaattccccttatagctgttactggtactgaattg
gttggtggagtgtctggtgagtcagaggaaagaataagggagttattcgatagagctgta
tcagttgctccgtgtgtgctattcattgatgaaatagatgcagtatgtggaaataggatc
catgctcaaaaagacatggaaaaaagaatggttgctcagttattggcgagtttagatagt
ttgaatgaaaatattgcttctgtcttgatactggctgcaacaaataatccagatgctttg
gaccctgccttacgaagagctggtcgattagaacaggaaattactttaggaattccatca
ttaaaggctagaaaagaaattttatcaatactttgtaaaaacttagccttagccgatgat
gtagatatgaatgctcttgcccaaataactccagggtttgtgggagctgatttgcaagct
cttgtaaacaaagcaagtacatatgcggttaaaaggatatttgccgagattcgtataaaa
aataaattagagacgttaaaaaaaactgaagaaacaaaaatcaatagtgaagaagtcaat
gttattcccaatggtgatggcagcagtgaggaatgtgtaaaagaacccgatgaacctgtc
gagagtacaacagaaccacctccgcaaacagattccactgaagtaactcctcaggaaact
aatgaaaatggaagtggcttaactaatcatgttgtagaagagccaataagcatacccacc
caactagacccagttgatgaagttttatgtcttcttgaaaataatataccctatactcca
gaagagttgactgggcttgcaataagctatgacgattttgtaaaagctcttaaaacaacg
aaaccctgtgctgtaagagagggtatagttactgttcccgatgttacgtgggatgatgtg
ggttcattaaatcaagtccggaaagatttacaacttgctgtattagctcctgtcaagtat
ccagagcaattaaaaaaacttggcctatccgcaccaagtggtgtattactatgtggacca
ccaggttgtggtaaaacattgctagcaaaagccgttgcaaatgaggctggtgttaacttc
atttctgtaaaaggtccagagctattaaatatgtacgtaggtgagagtgagcgtgcagtc
cgcacctgtttcaggcgagcccgtaattcggctccttgtgtaatatttttcgacgaattc
gatgccttatgtccgagaaggagttcacacgacaataacggagccgccagagtagttaat
caattgttgacagaaatggatggaatagaaagtcgcgaaggagtttttgttttagctgca
tccaatcgacctgacattatcgacccagcggttctgcgacctggacgtctagacaggata
atgtacgtcggcatgcctgcaactgaagataggttcgacattctaaagaaactgacaaaa
tcgggaacaaaacctcaacttgggccagatgtcgatttacaagttattgcagacttgaca
gagggctacacaggagcagatttatccggtttagtgagagctgcggcgacgaattcttta
acaaatcacattgcgaatggtaccctcgaaggcgagattttcgtgtcatttgaagacttc
agagctgccctttcaaaatgtaaaccttcagtatcatctaaagaacaattgcattatgag
aaactaagattgaagtatgcaggcggtatcgatgagaaagaaatggaaatggagactgaa
cttactaatgaagaatcaatggatacggtgtaa
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