KEGG   Vanessa cardui (painted lady): 124535672
Entry
124535672         CDS       T09161                                 
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
vcd  Vanessa cardui (painted lady)
Pathway
vcd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vcd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    124535672
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vcd03400]
    124535672
DNA repair and recombination proteins [BR:vcd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     124535672
SSDB
Motif
Pfam: XRCC1_N LIG3_BRCT BRCT_2 BRCT PTCB-BRCT
Other DBs
NCBI-GeneID: 124535672
NCBI-ProteinID: XP_046967927
LinkDB
Position
15:13805124..13810340
AA seq 623 aa
MPRVKIDYVVSFSSEDPENQANNILEWEVSKKKWLCSKGEPSCSIVLQLAKAVQIESINI
GAHHAASVEVLVGLSEKPNEPFEVLVPTCMLLSAGEARRGAAEQRVRSFSGAQLAPARAR
RWDRVRVVCAQPYNRHCQYGLSFVHIHEPESSAPRTFAFDALAADGDEVEFRPGELFASA
RRSTTDSQIRRATMDAIRNESDEHARLVKIPINKVAGRECRKDYDDSRSNRHKENLMYTD
DDIKPHDKIDQVVQRHRQQRDEEKTSHSRKTGDAREKEKLKISNTDSKTNKTVTPLKHAA
ADSSPQGKVVGKDATPPSTSHSKKRKRSDDEPGPRAAREADVLAGVTFTLSGYENPLRAE
LRAVGLRLGARYLPGWRGCSHLVCAFPNTPKLREARAGGGGAAAVAAEWLRACAARRRRL
PWRWFALDPRERLAPPADAALDAPDPDDGTDVDTDDEIEKVLQSQRKRSKINSPSADDAP
GSPPAADVVDDARDVSRDSDVTFVRDERVRDNITLDDSDSELTDRDEPPPRPETIDAEKI
LPHFFEGLTFTISDDLDGEYDRALLARYIRAYGGLVVEPAAALAGRAQYHVCGAAACGAG
ARCVRPEWVWRCHRRRALLADAR
NT seq 1872 nt   +upstreamnt  +downstreamnt
atgcctcgtgttaaaattgactatgtcgtcagtttcagtagtgaagatcctgaaaaccaa
gcgaacaatattttggaatgggaggtgagcaagaagaaatggctctgcagcaagggagag
ccatcctgctcaattgtgctgcaactggccaaagctgttcagatagaatctatcaacata
ggagcacaccatgctgcctcagtggaagttctagtaggattgtccgaaaaacctaatgag
cccttcgaggtgctggtgccgacgtgcatgctgctgtcggcgggcgaggcgcggcgcggc
gcggccgagcagcgcgtgcgctcgttcagcggcgcgcagctcgcgcccgcgcgcgcgcgc
cgctgggaccgcgtgcgcgtcgtgtgcgcgcagccctacaaccgccactgccagtacggc
ctgtcgttcgtgcacatccacgagccggagagctcggcgccgcggacgttcgcgttcgac
gcgctggcggccgatggcgacgaggtcgagttccggcccggggagctgttcgcgagcgcg
cgacgctcgaccaccgattcgcaaataaggcgagctacgatggacgctattaggaacgaa
tccgacgagcatgccagactcgttaaaattcccatcaataaagtggccggcagggagtgt
cgcaaggactacgacgattcgcgctcgaaccggcacaaggaaaacctcatgtacacggac
gacgatataaagcctcacgataaaatcgaccaggtggtccagagacacaggcagcaaagg
gacgaggaaaagacgtcgcacagtcgaaagactggagatgctcgagaaaaggaaaagtta
aaaataagtaatacagacagcaaaactaacaagacggtgacccccttgaagcacgcggct
gctgattcttcgcctcaaggcaaagtcgtcgggaaggatgcgactcccccgagtacatcg
cactccaagaaacgtaaacgatcggacgacgagccgggcccgcgcgccgcccgcgaggcc
gacgtgctggcgggcgtcaccttcacgctgagcggctacgagaacccgctgcgcgccgag
ctgcgcgccgtgggcctgcgcctcggcgcgcgctacctgcccggctggcgcggctgctcg
cacctcgtgtgcgcgttccccaacacgccgaagctgcgcgaggcgcgcgcgggcggcggc
ggcgcggcggccgtggcggccgagtggctacgcgcgtgcgccgcgcggcgccgccggctg
ccgtggcgctggttcgcgctggacccgcgcgagcgactggcgccgcccgccgacgccgcg
ctcgacgcgccggaccccgacgacggtaccgacgtggacaccgacgatgaaatcgaaaaa
gttcttcaaagtcaacgaaaaaggagtaaaataaattctccctcggccgacgacgctccg
ggctccccgccggcggcggacgtcgtggacgacgcccgcgacgtgtcccgcgactccgac
gtgacgttcgtgcgggacgagcgcgttcgcgacaacatcacgctggacgactccgactcg
gagctcacggaccgcgacgagccgccgccgcgcccggagacgatcgacgcggaaaaaata
ctaccgcacttcttcgaaggtttgacttttacgatctccgatgatttggacggcgagtac
gaccgcgcactgctcgcgagatacatccgcgcctacggagggctggtggtagagccggcg
gcggcgctggcggggcgcgcgcagtaccacgtgtgcggcgcggcggcgtgcggcgcgggc
gcgcgctgcgtgcggcccgagtgggtgtggcgctgccaccgccgccgcgcgctattggcg
gacgcgcggtag

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