Vanessa cardui (painted lady): 124535934
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Entry
124535934 CDS
T09161
Name
(RefSeq) transcriptional regulator ATRX homolog isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcd03000
]
124535934
03036 Chromosome and associated proteins [BR:
vcd03036
]
124535934
Transcription factors [BR:
vcd03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
124535934
Chromosome and associated proteins [BR:
vcd03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
124535934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-GeneID:
124535934
NCBI-ProteinID:
XP_046968297
LinkDB
All DBs
Position
15:4315012..4343713
Genome browser
AA seq
2050 aa
AA seq
DB search
MADAVPVRDVLCEAMEYLSKLGSNLRVRSENLKEKRLRKEKLKNVHAVQKAASKVLLICE
LSKKSIENVETGVKKILTQIDASQAQIDCGGKNDEKSITSKSCVTYEHFEYESHKLKIRD
KVNVKHFTSVTVLAKPLPKLLQDKYPVFHDCKLYRIRRKTQNNSKELDLNDANNINLTEK
CKEIENGSSQQDLVRLSSPEENESLDRNIKSKNNEMKEGSEINMETISNNINVEGSSKSR
NSNKSCYDDEIKNKKDRRKKYKNIKIIDSSDSDKDSKKEQNNTSGTDLSKTDVSNESNNV
ESEKNMKAKAGLISSLNDKENDKGNVPVDTEDSAKGSDLGKNKLNDGLTDKATEQDKSIQ
STELSGPDMIMQDIIESSIMQHYADDSEKECNKTNQSISAEKTKNISDDNIRVSTPVETA
NTDEHSNQSNEEGNSRTSFTVTKPTLESENSQGSLSDSKPFIKCVNINKLLREDKIPKTN
ESLIEIIDSDSDKEKKSDNKKNRHSEKDKFDKNKPRSMKKINKESLGSNKKKDDEEYWKQ
KRKEVKAFKPKNFVVNVTKLPKLTSDYLISNQLKRITHNGSVVCEIPMEGENDKQSSVNL
NEATNLRASTDINVIKNTLLHESDSDHDKRLKNALLNDSDSDKSNKDDKQPASNTDSQKA
KTATRKHKSKTLHSTSDLSDKKEDSNDIKSSLLHDSTDDSTPTKKRKRQSTDASSPPSKR
KHIMESMYAKKMLLTYSSSSDTEDENLRNALKEIRNTLLKGNSSDEENANEKNTPSKNSS
QRMQCALEQEKSQDTSEVDSSAKDTNSQIDEYSEEKSNTCSEKMGRSKGNSSDSSSQNSD
TQESIEKDIDGLTNLKSLNKKHRRRRSPSTDRTESSNSKTKKKMPKVPRFSEEGFLKAET
SSDAASLADSDVGEEVEIAAVPLSSLNGDGLEHLAKDDLLDESDSSSSHQKSSQDNKKEI
ESEDEDVKLKRRKANAISSDSEAGGSRKKDRDARLSDFEDSDDDASDLTKKAKRKKKGSD
SDASANSSVDGSKKKRRRIKNIDDSEGSGSESETEGRNKHGRKNIRKVMSKNQLEEATKK
AAREEKERIARIAERQKLYNNLEFDESGKPDEVVLDKVVLDFDPETKEPLIEVDKGLVKK
LKPHQANGIKFMWNACFESVKRIKKDKGSGCILAHCMGLGKTLQVVSLTHTLLTHSALTG
VNRVLVVCPLSTVLNWVNEFRIWLKHAVTDYEVDVYELSRYKQNSERAWQLQQWVGGGGV
CVLGYEMFRNLSADNVKKFKKKMLRSFQEALVDPGPDLVVCDEGHLLKNEKTSLSQAMNR
VKTLRRIVLTGTPLQNNLKEYYCMVQFVKPNLLGKYNEYLNRFVNPITNGQYTDSTEHDI
RIMKRRSHVLHKMLDGAVQRRDYGVLAPFLPPKHEYVLFITLTEVQIKLYQHYLDNYSRR
PLPGKSSGFLFPDFQSLQRIWTHPLVLKYNSERYEIMQQKKREREEEDSEGSLADFIDDD
STPDESSSEESSDSLSDMSDDSRKKNKKKKSAKKSKGKDSKITTRRGTRANPIELDDEEG
AEEEPQARAENPTEWWMALVSDDELDDLRHSHKLVLLFDILRQCEAIGDKLLVFSQSLYS
LDLIEHFLGKVDEATQEARVDEKLNGHVGSWSPGVDYFRLDGSTSCENRSIWCKNFNRED
NPRARLFLISTRAGGLGINLVAANRVVIFDVSWNPSHDVQSIFRVYRFGQKKPCYIYRFL
AMGTMEEKIYERQVTKQAISKRVIDEQQIDRHYAENDLAELYKFEPKPPVPRELPPLPKD
RLFAEMLKEHEAQIYKYHEHDSLLENKEEETLTEEERKAAWEDFENEKTRPPPTPFSAYA
MHNGMVPGLLAQQQQQLAYAALAAMLRKDMPNINDNQIRDMLPLIYNANPGMFGGYDYGL
MQKMSEIYKYTQPGMMNPGMMNAVMNPAGGVSGGMSLGGSSGLQYEPPWQRQQQQLRMQQ
MLQHQNMGAKYYAGGLGSRDPVAMALQQQRAREMMLGERSRPRGRPPGSARVEPPAALAA
PADVVNLDSD
NT seq
6153 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgctgttcccgttcgcgatgtcttgtgcgaagcaatggaatatttgtcgaaa
cttggatccaatttaagagtccgttctgaaaatttaaaggagaaaagattaaggaaagaa
aagctgaagaatgtacatgcagtgcaaaaagccgcgagtaaagttttattgatttgtgaa
ttgtcaaaaaagtctattgaaaatgtcgagaccggtgtcaaaaaaatattgactcaaatt
gatgcctcgcaagctcaaatagattgtggcgggaaaaatgatgaaaaatcaattacttca
aaaagttgcgttacttatgaacactttgaatatgaatctcataaattaaaaatacgcgat
aaagttaatgttaaacatttcacatcagttacagtactggctaaacctttgcccaaatta
ttacaagataagtatccagtatttcatgactgtaagttatatcgcataagaagaaaaaca
caaaacaacagtaaagaactggacttaaatgatgcaaataatattaatcttactgaaaaa
tgtaaagaaatagaaaatggctcaagtcaacaggatttagttaggctaagttcaccagag
gaaaatgagtctttagataggaatattaaatcaaaaaataatgaaatgaaagaaggttct
gaaataaatatggaaacaatttctaataacataaatgtagaaggttcaagtaaatctaga
aactctaataaaagttgctatgatgatgaaataaaaaataaaaaagatagacgaaaaaaa
tacaaaaatattaaaattatagacagctctgacagtgataaagattcaaagaaggaacaa
aataatacttcaggtactgacttaagtaagactgatgtttctaatgaaagtaataacgta
gaatctgaaaagaatatgaaagcaaaagcgggcttaatttctagtctcaatgacaaggag
aatgataaagggaatgttccggtggatactgaagattccgcaaagggatcagatttaggc
aaaaataaattaaacgatggtttaacagataaagctacggagcaagataaatcaattcaa
agcacagaattgagtggtcctgacatgataatgcaggatatcattgaatcctcaattatg
caacattatgccgatgattcagagaaagaatgcaataagacgaaccaatcaataagtgca
gaaaaaacaaaaaatatttctgatgataacatccgtgtttctactcctgtggagacagct
aatactgatgaacattccaatcaaagtaatgaagaaggtaacagtagaacatcttttact
gttaccaaacctactctagagagtgaaaatagtcagggctcactttcggattcgaaacct
ttcataaaatgtgttaatataaataaattattaagagaagataaaataccaaagacaaat
gaatcactaattgaaataatagatagtgatagtgataaagagaaaaaatcagacaacaag
aagaatagacacagtgaaaaagataaatttgacaaaaataagccgagatctatgaaaaaa
atcaacaaagaatctcttggttccaataaaaaaaaagatgatgaggaatactggaaacaa
aaaaggaaagaagttaaagcttttaaacctaaaaactttgttgttaatgttacaaagtta
cccaagctaacatctgattatttaatttctaatcagttaaaaagaataacccataatgga
tctgttgtgtgtgaaataccaatggaaggagaaaatgataaacaatctagcgttaattta
aatgaagcaactaatcttagagcttcaactgatataaatgtaataaaaaataccctattg
catgaatctgattctgatcatgataaaagattaaagaatgcccttcttaatgattcagac
tcagacaagagtaacaaagatgataaacagcctgccagtaatacagactcccaaaaagca
aaaacagcaacaaggaaacataaaagtaaaacattgcattcaacaagtgatttaagcgac
aagaaggaggacagcaatgatatcaaatcttcactgcttcatgattcaacagatgattca
acaccaaccaagaaaagaaaaagacaaagcactgacgcatcttcaccaccgtctaaaaga
aaacatattatggaaagtatgtatgcaaaaaaaatgttactaacatattcatcaagttcc
gatactgaagatgagaatttacgtaatgcattaaaggagataagaaataccttgctcaaa
ggaaactctagtgatgaagagaatgccaatgaaaagaatacaccatcgaagaattcttca
cagcgtatgcagtgtgccctcgagcaggagaaatcacaagatacttcagaggttgattcc
tctgcgaaagatacaaatagccaaatcgatgaatattctgaagaaaagtccaatacatgt
tctgaaaagatgggccgctctaaaggtaattcgagtgatagcagcagccaaaattcagat
actcaagaatcaattgaaaaagacattgatggacttacaaatttaaaatcgttaaacaag
aagcaccggcggcggcgctcaccctctaccgaccgcacagagagttcaaactcgaagacg
aagaaaaaaatgcctaaagtaccgcgttttagcgaagagggtttccttaaagcagagact
agttcggacgcagcttctttggcggatagcgatgttggcgaagaggttgaaatagcagca
gtaccgctctctagtctgaacggcgacggcctcgaacacctcgccaaagatgacctatta
gacgagagcgactcttccagctcacaccaaaagagctcccaggataataaaaaagaaatt
gaatcggaggatgaagatgtgaagttgaagcgtcgcaaagcgaacgcgatatcgtcggac
tcggaggcgggcgggtcgcgcaagaaggaccgtgacgcgcgtctcagcgacttcgaggac
tcggacgacgacgcctccgacctcacgaagaaggccaagcggaagaagaaaggctccgac
agtgacgcttcggccaattcctccgtcgacggcagtaaaaagaagcgtcgacggataaaa
aatatagatgacagcgaaggctcgggttcggaaagtgaaactgaaggcagaaataagcat
ggcaggaagaacatcagaaaggttatgagtaaaaatcaattggaagaggcaactaaaaaa
gcggctcgcgaagaaaaagaaaggattgctcgaatagctgaaagacaaaaactgtacaat
aacttggaattcgacgaatctggcaaaccggatgaagtggtactcgataaagtagtcctc
gattttgatccagagaccaaggagcctttgatagaggttgacaaagggctggttaagaaa
ttaaaaccacatcaggcgaatggcataaaattcatgtggaatgcgtgtttcgagagcgtg
aagcgaatcaagaaagataagggatctggctgcatattggcgcattgcatgggtctcggg
aaaacgctacaggtggtgtcgctaacacacacgctgctgactcacagcgcgctgacgggc
gtcaaccgcgtgttggttgtgtgtccgctgtccactgtacttaattgggttaacgaattc
cgcatctggctcaagcatgccgtgacagactatgaagtggatgtatatgagctctctagg
tacaagcagaactcggagcgtgcgtggcagcttcagcagtgggtgggcggcggcggcgtc
tgcgtgctcggctacgagatgttccgcaacctgtccgccgacaacgtcaagaagttcaag
aagaagatgcttcgcagcttccaggaggccctcgtcgaccccggtccggacctggtagtg
tgcgacgagggccacttgttgaagaacgagaagacgagcctctcacaggccatgaaccgc
gtgaagacgttgcgacgcatcgtgctcacggggacgccgctgcagaacaacctcaaagag
tattactgcatggtgcagtttgttaagccgaacctactaggaaagtacaatgagtacttg
aatcgatttgtaaaccccatcaccaacggccaatatactgactccacggagcatgatatc
aggattatgaagagacggtcccatgtgttgcataaaatgctcgatggtgctgtgcagagg
agagactacggggtgctggcgccctttttgcctccgaagcacgagtatgttctcttcatc
acccttactgaagtgcaaattaaattatatcaacactatttggataactattcaagaaga
ccattaccaggaaaatcatcaggattcctgtttccagactttcagtccctacagaggata
tggacacatccgctcgtgcttaaatataattcagagagatatgaaattatgcagcaaaag
aagagagaaagagaagaagaagactctgagggatctttggcagattttatagatgatgac
tcaacacctgatgaatcctcctcagaagaatcttcagatagtttatcggatatgagcgat
gacagtagaaaaaagaataaaaagaagaaatctgccaaaaagagtaaaggaaaggacagc
aaaataacaacgcggcgagggacaagagcaaatccaatagagctggacgacgaggaaggc
gcggaggaggaaccgcaggcgcgcgctgagaacccgaccgagtggtggatggcgctcgtc
agcgacgacgagctcgacgacttgcgccactcgcacaagctcgtactgctattcgacatc
ctgcgccagtgcgaggccatcggcgacaagctattggtgttctcacaatcactgtattca
ttagaccttatagaacatttcttgggtaaagtagacgaagctacacaagaagcacgagtt
gatgagaaattaaatggacatgtcggatcatggtcacctggtgtagattacttcagattg
gatggttccacgtcttgtgaaaatcgatcgatttggtgtaaaaatttcaacagggaagat
aatcctagagccagactgttcctaatatcgactcgagcgggaggcctcggcatcaatctc
gtggcggcgaatcgtgtcgtgatattcgacgtgtcgtggaacccttcacatgacgtgcag
agtatattcagagtgtatcgtttcggacagaagaaaccctgttatatttatcgatttttg
gcaatgggtacaatggaagaaaaaatatatgaacggcaagtgacaaagcaagcaatatcc
aaacgtgtgatagacgagcaacaaatagacaggcattacgcggaaaacgacctcgctgag
ctctacaagtttgaaccgaagccaccagtgccgcgtgagctccctccactccctaaggat
agattgttcgcagagatgttgaaagaacacgaggctcagatatacaagtatcacgagcac
gattcgttactggagaacaaagaggaggaaaccctgacggaggaagagcgtaaagcggcg
tgggaggacttcgaaaacgagaagacacgcccgccgcccacgcccttctctgcgtacgcc
atgcacaacggcatggtacccggtctgcttgctcaacaacaacagcagttggcatacgca
gccctggcggccatgctgcgtaaggacatgcctaacataaacgacaaccagatccgagac
atgctgccgctgatatacaacgccaaccctgggatgttcggtggatatgactatggcttg
atgcagaaaatgagtgaaatatacaagtacacccaacctgggatgatgaatcctggaatg
atgaacgcggttatgaatccagccggtggtgtaagcggaggcatgtcgctgggcggcagc
agcgggctgcagtacgagccgccgtggcagcgtcagcagcagcaactccgaatgcagcag
atgttacaacatcagaatatgggtgcgaagtactacgccggcgggctcggtagccgcgac
cccgtggcgatggccctgcagcagcagcgcgctcgggagatgatgctcggcgagaggtcg
cgcccgcgcggccgcccgcccggcagcgcgcgcgtcgagccccccgccgcgctcgccgcg
cccgctgacgtcgtcaaccttgactcggactag
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