Vanessa cardui (painted lady): 124536200
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Entry
124536200 CDS
T09161
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124536200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcd03041
]
124536200
03009 Ribosome biogenesis [BR:
vcd03009
]
124536200
Enzymes [BR:
vcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124536200
Spliceosome [BR:
vcd03041
]
Complex A
U1 snRNP components
U1 related factors
124536200
Complex B
124536200
Ribosome biogenesis [BR:
vcd03009
]
Eukaryotic type
Pre-60S particles
Helicases
124536200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
DUF371
Motif
Other DBs
NCBI-GeneID:
124536200
NCBI-ProteinID:
XP_046968637
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All DBs
Position
16:6845175..6855054
Genome browser
AA seq
838 aa
AA seq
DB search
MQYNSFHNQHPIFRPRLDRNEQFGKIPFFNGLHDFGGPKNFTPRNGMGNKNFRPRNDFNG
VRNDYNNFKNENGNPADFGGPKEYRPRNNYNQTQKKNDYDGEKNAGGNMQFYNGKNDFGG
PKQQNFPKNLGPKNFNNQNGLNNCQQYVPKKIYNNSSSPSSDFNDRKMQSRKAKHPGDSL
IKPEWDMASLDTIQKNFYKPHANVEGRSEEEVQMFRAAKEITVSGNNVPRPNHVFDEGNF
PDHVMSTIKEQGWEEPTGIQAQGWPIALSGRDMVGIASTGSGKTLAYMLPAAVHIVHQPR
IQRGDGPIALILAPTRELAQQIQSVAQAYSARGCIRNTCLFGGSPKGPQARDLERGVEIV
IATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT
WPKEIQALAEDFLTDYIKVNIGSLNLSANNNIKQIIEVCEEHEKEAKLSNLLKEIASEKD
NKVIVFVETKKKVDDIARAVRRNGHKALAIHGDKSQPERDAVLTEFRNGATTILIATDVA
ARGLDVEDVKFVVNFDYPNSSEDYIHRIGRTGRCQQSGTAYTYFTSGDARQARALVAVLR
ETGQNPPAKLSDMARNNNNSSSRNRWQQRKENNSGASSPRQKSNQWNNKMANMSNEENQN
NYQNRNLQQHQQQQQQQQQQQAPRFSNQNQNTNQGYRQNSYQKTVPFPSPNVFESMGSYQ
GGYNNGYQNAYNNQNGYGQRTFNNARGNGGQQYHRNTNSVGNKSAGSGSSYGSPPPHFAT
PPHYTQMHPHHQEMLGGKFYGGGVGGGGPCGYQAAVGAGVPYPHLPPGPLLYAAPVQQ
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacaacagctttcacaatcaacatcctatctttagacctcgactagaccggaat
gaacaattcggtaaaattcccttcttcaatggcctgcatgattttggtgggccaaaaaat
tttacaccaagaaatggaatgggcaacaaaaacttcaggcctagaaatgattttaatggc
gtaagaaacgattacaacaatttcaaaaatgaaaatggaaatcctgccgattttggcgga
ccaaaagaatacaggccaagaaataactacaaccaaacccaaaaaaagaatgattatgat
ggagaaaaaaatgctggaggcaacatgcaattttacaatggaaaaaatgattttggcggc
cctaaacaacaaaatttccctaagaacttgggccccaaaaactttaataatcaaaatggt
ctcaataattgtcaacaatatgttcccaaaaaaatttataataattcctcgtcaccgtca
tcagatttcaatgatcgtaagatgcaaagcaggaaagctaaacatcctggtgatagcctg
ataaaaccagaatgggatatggcaagccttgatacaattcaaaaaaatttctacaaacca
catgctaacgttgaagggcgttcggaggaagaagtacaaatgttccgtgcagctaaagaa
atcactgtaagtggaaataatgtccctcgtcctaaccatgtgtttgatgaaggtaatttt
cctgatcatgtaatgagtactattaaagagcaaggttgggaagaacctacaggtatccaa
gcacagggatggcccattgcattgtctggtcgagacatggtaggaattgcatctactgga
tcagggaaaaccttagcttacatgctacctgcagccgttcatatagttcatcaaccaaga
atccaacggggcgatggccctattgctctcattctggctccaacaagagaattggcacag
caaattcaatcagtagcacaagcttacagtgcccgtggttgtataaggaatacttgccta
tttggtggttcaccaaaaggaccacaagctagagacttagaaagaggcgtcgaaattgtt
attgccacaccagggcgattaattgatttcttagagcgaggaactacaaacttacgtcgt
tgcacttatttggttttggatgaagcagacagaatgttggatatgggattcgaacctcaa
atccgcaaaataattgaacagatccgtccggaccgtcaagttttgatgtggtccgctact
tggccaaaagaaatacaagctcttgctgaagatttcttaactgattacattaaagttaat
attggttcattaaatctctctgcaaataataatataaagcaaatcatagaagtctgtgaa
gaacatgaaaaagaagcaaaactatcaaatttgttgaaagaaattgcttcggaaaaggac
aacaaagttattgtatttgttgagacaaagaaaaaagttgatgacatagcacgtgcagtg
cgacgcaatggacacaaagctttagctattcacggcgataagtcgcaacctgagcgcgac
gccgttttaaccgagtttcgcaatggagccacaaccattttgatagctactgatgttgct
gctcgtggtttagatgttgaagatgtaaagttcgttgttaattttgattatccaaattca
tctgaagattacattcacagaattggtcgtacaggccgttgccaacagtctggtacagca
tacacttattttacgagtggtgatgctcgccaggcccgcgccttagtggcagtgcttcgt
gaaacgggtcaaaatcctcctgctaagcttagcgatatggcaagaaacaacaacaacagt
tcaagtcggaatcgctggcagcaacgcaaagaaaacaacagtggtgccagttcacctcgc
caaaagagcaatcaatggaataataagatggctaatatgagtaatgaagaaaatcaaaat
aattatcaaaatcgtaatttacaacaacatcaacaacaacagcagcaacaacaacaacaa
caagctccacgattttctaaccagaaccaaaacactaatcagggctatagacaaaacagt
taccaaaaaactgtaccttttcctagcccaaatgtattcgaatcaatgggaagctaccaa
ggaggatacaacaatggctatcaaaatgcatacaacaatcaaaatggttatggacaacgt
acgttcaacaatgcacgtggaaatggcggtcaacaataccatcgtaatactaactccgtt
ggaaataaatcagctggatcagggtcttcttacggatctccaccacctcattttgctaca
ccaccccattacacccaaatgcatcctcatcaccaggaaatgcttggaggcaaattttac
ggtggtggcgttggaggcggcggcccttgcggctaccaagcagctgtaggagctggtgtt
ccatacccacatctaccacctggcccgctattatatgcagcaccagttcaacagtaa
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