Vanessa cardui (painted lady): 124536214
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Entry
124536214 CDS
T09161
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124536214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcd04131
]
124536214
Membrane trafficking [BR:
vcd04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124536214
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
Beta-prop_EML_2
TPR_Vps8
C1_1
Beta-prop_LRRK2
WD40_CDC20-Fz
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
124536214
NCBI-ProteinID:
XP_046968657
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Position
16:complement(7723578..7731646)
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AA seq
1131 aa
AA seq
DB search
MDLLKTPSTQSLLDSDLESVESLQYVDFEELDEVEYALPASEAPTLAEVLSSDVLENENK
LPFKNLEESTTCSALQVDFLQAISQQLTQAQERSSAGAATTLSIGSNGRLSVGTAHGHIL
SFHDQTLRWVCDANGDNGAVTCLSYNHDSTRLLAGFARGLVYQYESIRGIILRRVVLGGE
IWGTLRVTWAGTSGLALDTGGSVWLIKFSRPLGVRSARVSCLFSGARGEVVAMSARDARI
LALATLSRVIIVAGGRAAGVRLDGPADVLPVLEWCELDVRMLVCARANIMQWLAVSLSGS
SINLRPVQRVELKSSPIWLGWLGGGLAIFDSDENLRLWGDDYDKPLDLSQIEPVYSSAFF
KGHWTDGRVSRAMCKAGESALGGACISEGTLALLGRRGVVRVKPRDLLARAQAFIASGRY
TQALRLLCSSQGPETKKLAIEFIGNLADRPHILSNKNIAVQVVKLCLKYDLSDELWNCLW
ENCSGEQAFVEALGDAAVRGEFSNSPPSPDFTQDLIEKLAEFEPELVERVVASLPLTSLD
PHRASVFTRQRGLWRGVGAIAAALDGCSGAMRELVAHVQPSCGGGGSGRCACAGAALLLA
AADALAGRGAGGRALPAHARPSARHDALHALLAEEGGVGSPLRVLVRHDTSAAVRLLEQC
AREPPFAGPLGKQNRLRVARALLACTADLQESERRVEIIEFIAGQLQAGALPLDQEVIKN
IQQLVDSTDCERADRAWLAILARIRTQRDQMLLQYRDAVLRPRVLWRIDSMLDRHDEALK
QFFNIQNPSDQDIDEFFEYLRTRVEADADTRLRIQPYFSALVELRPRLAAALLDENCNES
LGTILDSLSSKCKIEFGQCLIEMGRLRGDAAAIYLRNLGILHPSDVKDFLIKNPGIIRPE
DALGIVRDLRLSEAEPVCLEATGDYAGALEALLALISTTRDENTKEDLISEASGLCLRVA
PTVPPQAAAEMWTRLLRSVGSVPPTLLFEAIAFLPIEELVVETCDSTRVALTILAGGAGR
REVWECVSRVRRREAHEALARALAAARRGLAVRGRCRRCERPLGSRAGVRTGHCARAFHA
DCEAEASCACGRRAPAESLALAPLPRRRVAAPQDYNLQLVAPPRPDLDGVV
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggatttattaaaaacaccttcaacccaatctttactagattctgatttagagtcggtt
gaaagtcttcagtatgtagattttgaagagcttgatgaagtcgagtatgctttgcctgct
agtgaagctccgaccctggcagaagttttgtcatcagatgtattagagaatgaaaacaaa
ttaccttttaaaaatcttgaggaatctactacatgttctgccttgcaagttgatttccta
caggctatttctcagcaactgacacaagcccaagaacgatcatcagctggcgccgctaca
acattaagtataggatctaatgggagactgagtgtagggacagcccacggacatatccta
tcatttcatgatcaaacgttacgatgggtttgtgatgcaaatggcgacaatggggctgta
acatgtttatcatataatcacgatagtactcgccttttggctggctttgcacgtggttta
gtatatcagtacgagagtatacgcggtataatcctccgacgtgtcgtgcttggtggagaa
atatggggaacattgagagtcacctgggctggaacatcgggtctagcattggacacagga
ggttctgtatggctaataaagttttcaagacccttaggagtacgttctgcaagagtttcc
tgcttgttttcgggcgcccgtggtgaagttgtggctatgagtgcccgtgatgctcgtatt
ctagccctagcaactctatcaagagtgataatagtagcaggaggtcgcgcagccggagta
cgattagacggccctgcagatgtgcttcctgtgctggagtggtgcgaattagacgttagg
atgcttgtatgtgcacgtgcaaacataatgcaatggcttgccgtatcattaagcggatca
tcaataaacctgcgacctgtacaacgcgtggaattgaaatcctcgccgatatggctcggt
tggcttggtggtggtctggctatttttgattctgatgagaaccttcgactttggggcgat
gattacgacaaaccgttggatttatctcaaatagaacccgtgtattcgtctgcttttttt
aagggccactggacagatggtcgcgtgtcacgggccatgtgcaaggcgggtgagagtgcc
ttaggaggtgcctgcatatcggaagggacattagcgctcttgggacgtcggggcgtcgtt
cgtgtaaaacctcgtgatcttctagcaagggcacaagcttttatagcatctggacgttat
acgcaagctctaaggttgctctgctcatctcagggcccagaaacgaagaaactagccatc
gaattcattggaaatttggcagataggcctcatatattaagcaataaaaatattgctgtc
caagttgtcaagctgtgtctcaaatatgatttgagcgatgaattgtggaattgtctttgg
gagaattgttcaggcgaacaagctttcgttgaagcattaggagatgccgcggtacgaggc
gagttttctaactcgccaccctcgccagattttacacaggatctcatcgaaaaattagcc
gaattcgagccggagttggtggagcgagttgtggcgtcgctgccgctgacgtcgttggac
ccgcaccgcgccagcgtgttcacgcgccagcgcggcctgtggcgcggcgtgggcgccatc
gccgccgctctggacggctgcagcggcgccatgcgcgagctagttgcgcacgtgcagccc
tcgtgcggcggcggcggctcggggcgctgcgcatgcgccggggctgcgctgctgctggct
gcggccgacgcgctggcggggcgcggcgcggggggcagggcgctgccggcgcacgcgcgc
ccctccgcccgccacgacgctctgcacgcgcttctcgccgaggaaggcggcgtcggctcg
ccgctgcgcgtgctggtgcggcacgacacgtcggcggccgtgcggctgctggagcagtgc
gcgcgcgagccgcccttcgcgggcccgctcggcaagcagaaccgcctgcgcgtggcgcgc
gcgctgctcgcctgcaccgccgatctgcaggagtccgaaagacgagtagaaataatagaa
tttatcgctggacagctacaagcgggcgcattgccgctcgaccaggaagtcataaaaaac
atacaacagctagtagacagcaccgactgcgagcgagccgaccgggcgtggctggcgata
ctcgcgcgaatacgaactcaacgagaccaaatgctcttgcagtacagggacgccgtcctc
cgaccgcgcgtgctctggcgaatagattccatgctggatagacacgacgaggctctaaaa
caattttttaacattcaaaatccctccgatcaagatattgacgaattttttgagtacctt
agaacgagagttgaggccgatgctgatacgagacttcgtatccagccgtatttttcagcg
ctcgtcgaactgcggccccggttggcggcagccctgttggatgaaaattgtaatgagtca
ctcggcactattctagatagcctaagctcgaagtgtaaaattgaattcggtcaatgctta
atagaaatggggcgtctccgcggcgatgctgctgcgatttacttgcgaaatctgggcatt
ttgcatcctagcgacgtcaaagattttctaataaagaacccaggtatcatcagaccggag
gacgcgctgggtatcgtaagagatctaaggctcagcgaagcggaaccggtctgcctagaa
gccaccggcgactacgcgggcgctctcgaagcactccttgccctaatatcgacaaccagg
gacgaaaatactaaagaagacctgataagcgaggccagcggcctgtgcctgagagtcgcg
ccgaccgttcccccgcaggccgccgcggagatgtggacgcgactgctacgcagcgtcggc
tccgtgccgccgactctgctattcgaagccatcgccttcctccccatcgaggagctggtg
gtggagacctgcgactcgacgcgagtggccctcaccatactggcgggcggcgcgggcagg
cgggaggtgtgggagtgcgtgtcgcgcgtgcggcggagggaggcgcacgaggcgctggcg
cgcgcgctggcggcggcgcggcgcgggctggccgtgcgcgggcgctgccggcgctgcgag
cgcccgctgggctcgcgggccggcgtgcgcacggggcactgcgcgcgcgccttccacgcc
gactgcgaggcggaggcgagctgcgcatgcggccggcgcgcgcccgccgagtcgctggcg
ctggcgccgttgccgcgccgccgcgttgccgcgccgcaggactacaacctgcagctggtc
gccccgcctcgacccgacttggacggtgtcgtgtga
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