Vanessa cardui (painted lady): 124536392
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Entry
124536392 CDS
T09161
Name
(RefSeq) sodium-dependent serotonin transporter-like
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
124536392
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcd02000
]
124536392
Transporters [BR:
vcd02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
124536392
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
124536392
NCBI-ProteinID:
XP_046968879
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Position
16:9451240..9461015
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AA seq
536 aa
AA seq
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MSESLSSRTKTLTDSIESVSTQEPLIQDRWTNNISYRQLVISSCIGIVQMWWHPYVYDLK
RLVPFLFLYNVFSVFFAYPAFYMELALGIVTKKGVLNCWDMAPVARGIGVAMLVSCIFMA
LSLGAVSAWCLALVVHSIHSFLPWLHCASSAHPPCAARHRPLPKGSETPAQSFFFNFVLN
LKRDGLQGGLGNVVSELTVYYVISWVLVYFVSCKRIYSYSKLVLFKDLIAFFVIVSSAAG
VVRLKGSSRMFNECDWSVLYDGLELWRDALEYCFVQMALSQGTLVMLGSYCPKQKHMLAN
TSMYAFAVSKLCCTASALILGAAHGALYKDYDNSTNIWKGSPSSLIIWADYVARIPGSQF
WSVLIFFTLFVLSISSTALLVQTIMSTFTGRLVRKITWAFLILICVLFCFIGIITLCTQG
GMYILNFLMTWPVSKPRTPIAAFVAIVITYVYGQTTFCEDIYFAVGEYPCVFLRICWALA
PVPLLVFFVSGIASWPLADIVAGWIPVMLTLVPVAVYMIFYLVFKFRVRNIVGTEK
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagcttgagtagtcgaacaaaaactttaacggactctatcgaatcggtgtcg
acccaagagcccttgattcaagatcgatggactaataacataagttaccggcaactagtc
atatcttcatgtatcggcatcgtccaaatgtggtggcatccttacgtatacgacttaaag
cgtcttgtgccgtttctcttcctctataatgtatttagcgtgttctttgcatatcctgca
ttctatatggaactcgctttaggaattgtcacaaagaaaggtgtattgaactgttgggat
atggcgcccgttgcgagaggtatcggagttgctatgctcgtatcgtgcatatttatggcc
ttatcattaggggcagtaagtgcatggtgcctcgctctagtggttcattccattcactcg
ttcttaccctggctccactgtgcttcctctgcccaccctccgtgcgcggcgagacataga
ccgctaccgaaaggaagtgaaacgccggcgcagtcgttctttttcaattttgtattaaat
ctaaagcgcgatggcttgcaaggaggactcgggaacgtggtgtctgagttgacggtatac
tacgtcatatcgtgggtgctggtctacttcgtttcttgcaaacgaatatatagttactca
aagttggtgctatttaaagatctcatagctttcttcgtgatcgtgagcagcgctgctggt
gtggtcaggttaaaagggtcttccagaatgttcaatgagtgcgattggagtgtgctctat
gatggtttagagttgtggcgcgatgctctcgaatattgtttcgttcaaatggctctttct
caaggtacactggtaatgctcggttcatactgtccgaaacaaaagcacatgcttgcaaac
acgtcgatgtacgcattcgctgtatcgaaactttgttgcaccgcaagtgcactcatactt
ggagctgctcatggtgctttgtataaagattacgacaatagtacaaatatatggaaaggg
tcgccatcttcattaataatttgggcagattatgtagcaaggataccaggaagtcaattt
tggtccgttcttatattttttacacttttcgtactctcaatatcttccacggctctattg
gtgcaaacgatcatgtcaacatttactggacgattagtacgaaagatcacatgggcgttc
cttatactgatctgcgttttgttctgtttcattggaatcatcactttatgtacacagggc
ggcatgtacatccttaattttctaatgacttggcctgtttccaagccacgaacgccgatt
gcggcatttgtagccatagtaattacctacgtatatggacagacaacgttttgtgaagat
atttattttgccgtaggagaatacccttgtgtgtttctgaggatttgctgggctttggcg
ccagtaccgcttttggtattctttgtatctgggatagcgtcgtggccactggcggatatc
gtagcggggtggataccagtgatgcttactttagtacccgtggcggtgtacatgatattt
taccttgttttcaaatttagagttcggaatattgtgggcactgagaaatga
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