Vanessa cardui (painted lady): 124536816
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Entry
124536816 CDS
T09161
Name
(RefSeq) chromatin assembly factor 1 p55 subunit
KO
K10752
histone-binding protein RBBP4
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03082
ATP-dependent chromatin remodeling
vcd03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124536816
03083 Polycomb repressive complex
124536816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcd03036
]
124536816
Chromosome and associated proteins [BR:
vcd03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
124536816
Histone modification proteins
HAT complexes
HATB complex
124536816
HDAC complexes
Sin3A-HDAC complex
124536816
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
124536816
PRC2.2
124536816
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
124536816
Heterochromatin formation proteins
Other heterochromatin formation proteins
124536816
Chromatin remodeling factors
NuRD complex
124536816
NuRF complex
124536816
NuRF complex (fruit fly)
124536816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
WD40_WDHD1_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
Beta-prop_SPT8
MIOS_WD40
NBCH_WD40
Beta-prop_DCAF4
YqbF
Motif
Other DBs
NCBI-GeneID:
124536816
NCBI-ProteinID:
XP_046969389
LinkDB
All DBs
Position
17:complement(9550015..9555222)
Genome browser
AA seq
432 aa
AA seq
DB search
MGDKGDGETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEG
KDYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNDKGEFGGFGSVSGKIDIE
IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPEPSGECHPDLRLRGHQK
EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEGRVIEAKSVFTGHTAVVEDVAWHLL
HESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTV
ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQTAED
AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPETPA
SELESGVNVNHG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgggtgataaaggtgatggagaaacgttcgacgatgctgtggaggaaagggttattaac
gaagaatataaaatatggaagaagaacacaccgttcttgtatgacctggtcatgacacac
gctctggagtggccctctcttactgcacagtggcttccagatgttactagacctgaagga
aaagattattccgttcacaggctaattctgggtacgcacacatcggatgaacaaaaccat
ctcctgattgcaagtgtccagctacctaatgaagatgcacagtttgatgccagtcattat
gacaatgataagggtgaatttggtggttttggatctgtatcgggtaaaatagatatagaa
ataaaaataaaccatgagggtgaagtgaatagagctcgctatatgccacagaatccttgc
gtcattgcaacaaaaactccatcctctgatgtgttagtgtttgattacaccaagcatcct
tcaaaaccagaaccttctggagaatgccatcctgatcttagattgcgtggtcaccaaaaa
gagggctatgggctatcctggaaccctaacctcaatggctatctactttcagccagtgat
gaccacacgatctgcctgtgggacatcaacgcgacgcccaaggaggggcgcgtgatcgag
gccaagtctgtgttcactggccacaccgcagtggtggaggacgtggcctggcacctgtta
cacgagtcactcttcggctcagtggctgacgaccagaagcttatgatttgggatactaga
tgtaacaatacctctaagccgtcacacacggttgacgcacacacggcagaagtcaactgt
ctcagcttcaacccttattcagaatttatcctggcgactggcagcgctgataaaactgtc
gctctatgggacttacgtaatttgaaactcaaactacactcattcgaatcacacaaggat
gaaatcttccaagtgcagtggtcaccgcataatgaaacaatccttgcaagcagcggtact
gatagaagactgcatgtgtgggacctgtccaagataggcgaggaacagacggcagaggac
gccgaggacggccctccagagctgctatttatacatggcggacacactgccaagatctca
gacttctcctggaaccccaacgagccctgggtcatctgctccgtctccgaggacaacatc
atgcaggtgtggcagatggccgagaacatttacaacgacgaggagccagagacgccggcc
tcggagcttgagtcgggcgtcaacgtcaaccacgggtaa
DBGET
integrated database retrieval system
