Vanessa cardui (painted lady): 124537007
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Entry
124537007 CDS
T09161
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd04120
Ubiquitin mediated proteolysis
vcd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124537007
04120 Ubiquitin mediated proteolysis
124537007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vcd04121
]
124537007
Enzymes [BR:
vcd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124537007
Ubiquitin system [BR:
vcd04121
]
Ubiquitin ligases (E3)
U-box type E3
124537007
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
124537007
NCBI-ProteinID:
XP_046969669
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All DBs
Position
17:4018151..4030018
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AA seq
1221 aa
AA seq
DB search
MSELSQEEIRRRRLVRLAALGGTGSSPAPTSPPVTPGASVPNDILSPVSTPRLSPAPTQT
PRSSNEISESTNKEQNFSETKNEVADQGKISADGLIVTEKTDNNLMDEMPDTKMTDLSQT
RQYNSFDSMGEDTLLSCGSVRVLPQSTVSGSEGASTREDSTSRSISPAQFVEPPPVRPRT
STSSPSCSRRSLSMEVDDVSERNSQSEQPQEPMEVEDDPTQSPTHKLQRSRTVSCTELTE
EQLRNIVAKILQVSWSDDSAGGIFVPTVAASLLDNPKISLEELASEAVMDVISQIIDGSD
PLNQRLIAVTETTKRLSEDCGDDILTTGHLGSENDSEKTDCPTPSLPIPKTIPQQSLAVS
YILKFYSNINLYEREHPKKSSEPPLSDLLQSIRTLLVNNLVSVLRGRFELEKGRKSPLLP
YILIGNTPIGLIPEVLLATYPEREAFEEVFIPLLMGIREEMRRCVSPLVGRGHGAALRAL
RSLCELRAGPRHAARPVCALVARLPSLCPAPLTTAPGREIARVSFLGPFFAISLFAEENP
RFAERMFATGTDQSLAFALQREVEASRNTLHSICHNILLCPEAREPFLKYFATLLQRNER
RAQLQTDERSLAGDGFMLNVCSVLQLLSVRIKLERVYPLYTFQPGTWINVRDETRLYFTA
QEAQDWLDTLNNDPSHTWPEAKFQTVCWFLTLHMHHVALIPALHTHQRRIRAFRDLQKVI
EELIAAEPQWRNSYSALRNRELLRRWRRQIKRLHRSKQCAETALLDPELMRRGVQFYASV
CALLVRQLHAAAAEPASAAALAFRATPEWYVEDIAEFMLFAVQYVPQIVAYYIEDPIITW
LLTAICNSHLIKNPYLVAKIVEVLFVINLSLPIKLKNDAVYEKFMDHPMSQTALPSALMK
FYTDIETTGQSTEFYDKFTIRFHISIILKSMWERPIHKQAIVKESRSGRQFVKFINMLMN
DTTFLLDECLTYLKRIHEAQEAEARGSGEARARALAQDERQCRSYLTLARETVDMLQYLT
VEIKEPFLRAELVDRLASMLNFNLQQLCGPKCNNLKVRRPEMYGWEPRRLLSQLVDIYLH
LDAPQFHAALAADERSFRKELFEEAALRLAKSCIKTPSEIERFKTLADNAYQIAVSNQQK
SDEFADAPEEFRDPLMDTLMTDPVFLPSGKVMDRSVILRHLLNSATDPFNRQPLTEDQLR
PATELKERIIQWQREKKTSTS
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactcagtcaagaagagatacgaagacgtagattggtgcgactagcagctctt
ggaggtactggatcgtctccagcccccacaagccccccagtaactcctggtgcttcagta
ccaaacgatattctaagtccagtgtccactcccagattgtcgccagctcctacacaaaca
ccccgcagttccaatgaaatttcagaaagcacaaacaaagaacaaaatttttctgaaacg
aaaaatgaggtggcagatcaaggaaaaatttcagctgatggtttaatagtcacagaaaaa
acagacaacaacttgatggatgaaatgccagatacaaaaatgacagatctatcccaaact
aggcaatataatagttttgattctatgggtgaggacacattactgagttgtggttctgtt
agagttttaccccaatccacagtaagtggctcagaaggtgcatccacaagagaagacagt
acatctcggtctatttcacctgcacagtttgtagagccaccaccagttagaccaagaaca
agtacatcatcacctagttgctcacggcgctctctatcaatggaagttgacgacgtttca
gagaggaattctcagtcagaacaaccgcaagaaccaatggaggttgaagatgatccaaca
caatctcccactcataaattacaaagatctcggacagttagttgtacagaacttacagaa
gaacaacttagaaatattgtggccaaaatattacaagtttcctggtcagatgatagtgca
ggtggtatttttgtaccaacagtggcagcatcgttgttggacaatccaaaaataagttta
gaagaattagcatccgaagctgtaatggatgttatttcccaaataatagacggatcagat
cccttaaatcagaggcttattgcagtcactgaaacaactaaaagactcagcgaagattgt
ggagatgatatactcacgactggacacctgggatccgaaaatgattcagaaaaaacagac
tgcccaacaccatcactgcctattccgaaaactatccctcaacagagcttagccgtcagc
tacattttaaaattctactcgaatataaatttgtatgagagggagcaccccaaaaaaagt
tcagaaccgcctctcagtgatctactacaaagtataagaactttactcgtgaacaattta
gtgtcagtactaagggggaggttcgaactggaaaagggtcgaaaatctcctctcctccct
tacatattaatcggtaatacgcccataggcctcatacccgaggtgctgctcgcgacatac
ccggaacgagaagccttcgaggaagtattcattccactgctgatgggcatccgcgaggag
atgcggcgctgcgtgtcaccgctggtggggcgcgggcacggcgcggcgctgcgggcgctg
cggtcgctgtgcgagctgcgcgccggcccgcgccacgccgcgcgccccgtgtgcgcgctg
gtggcgcgcctgcccagcctgtgtcccgcgccgctcaccaccgcgcccggccgagagatc
gccagggtcagcttcctgggaccgttctttgccatatccctgttcgcggaggaaaaccct
cggtttgcggagcgcatgtttgcgacgggcaccgatcagagcctggcgttcgccttgcaa
agggaagtggaagctagtcggaatacgctgcacagcatctgtcacaacattcttctgtgc
ccggaagcaagggagcctttcctgaaatactttgcgacgctactacagagaaatgaaaga
agagcccagttgcagaccgatgaacgatcacttgctggcgacgggttcatgttgaacgtg
tgctcggtattgcaactgttgtcggtgcgcatcaaactggagcgagtgtacccgctgtac
acgttccagccgggcacgtggataaacgtgcgcgacgagacgcgactctacttcaccgcg
caagaggctcaggactggctggacacgctcaataatgaccccagccacacgtggccagag
gcaaaattccagacagtgtgttggtttctgactttgcacatgcaccacgtggcgctcatt
cctgccctgcatactcatcagcgacgcataagggcgtttcgtgacctgcagaaagtgatc
gaggagctgattgcggccgagccgcagtggcgcaacagctactccgcgttgcgtaaccga
gagctgctgcgacgctggcggcgacagattaaacgtctacacaggtcgaagcagtgcgcg
gagacggcgctgctggacccggagctgatgcggcgcggcgtgcagttctacgcgtccgtg
tgcgcgctgctcgtgcggcagctgcacgccgccgccgccgagcccgcctccgccgccgcg
ctcgccttccgcgccacgcccgagtggtacgtcgaggacatcgccgagttcatgctcttc
gccgtgcaatacgtcccgcagatagtcgcctactacatagaggatccgataattacatgg
ctgctgaccgccatttgtaactctcatctcatcaagaacccgtatctcgtcgccaaaatc
gttgaagtgttgttcgttatcaatctctcgctcccgataaagctcaaaaacgatgccgtt
tatgagaagttcatggatcatccgatgtcccaaaccgccttgccgagcgctctgatgaag
ttctacacggacatcgagacgaccggtcagagtacggagttctatgacaaatttacgata
agattccatattagcataatactcaagagtatgtgggaaagaccgattcataaacaggct
attgtcaaagaatctcgatcgggtcgacagtttgtgaaatttatcaacatgctcatgaat
gacacgacattcctcctcgacgaatgtcttacgtacctgaaacgcatccacgaggcgcaa
gaggcggaggcgcgtggctcgggcgaggcccgcgcgcgcgcgctggcgcaggacgagcgc
cagtgccgctcctacctcacgctggcgcgcgagaccgtcgacatgctgcagtacctcacc
gtggagatcaaggagccgttcctgcgcgccgagctcgtcgaccgcctcgcctctatgctc
aacttcaacctccagcagctctgcggccccaagtgcaacaacctcaaggtgcgtcggcca
gagatgtacggctgggagccaaggcggcttctgagtcagcttgtggatatctaccttcat
ctcgatgcgccacagttccacgctgcgctcgccgctgacgagcgatcattccgtaaggag
ctattcgaggaagcggcattgcgactagcaaagtcgtgcatcaagactccctctgaaata
gaacgattcaaaacacttgcagacaacgcataccagattgctgtatcaaatcagcaaaag
agtgacgaatttgcggatgccccagaggagttccgagatccacttatggatacactgatg
actgaccccgtattcttgccatcaggaaaggttatggatcgatcagtaatactgcgacac
ctgttaaacagcgctacagatcctttcaacagacaacctctcacagaggatcaattgcgt
ccagcgacggaattaaaagaaagaataattcaatggcaacgcgaaaagaaaacatcaaca
tcataa
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integrated database retrieval system
