Vanessa cardui (painted lady): 124537293
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Entry
124537293 CDS
T09161
Name
(RefSeq) retinoblastoma-like protein 2 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124537293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcd03000
]
124537293
Transcription factors [BR:
vcd03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
124537293
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
DUF5087
Motif
Other DBs
NCBI-GeneID:
124537293
NCBI-ProteinID:
XP_046970041
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Position
18:complement(4459983..4472034)
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AA seq
912 aa
AA seq
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MSKQDESEDNWIAAMDNLCSKLNVDPVAAKKSKESFSEIKQNYTLDGDILHWMACALYVA
CRTSITPTVQTGKAVEGNCVSLTRLLRLCNISLIQFFNKIKNWMEMASMSTDFKDRITRL
EHKFAVSTVLFRKFQPIFQEIFSGLTNEPVKTSTKSKKQKLQPCTTNALFEFTWCLYVCV
KGEFHNSADDLVDMYHVLLSCLDFAFANAFMARRIDLINPAFKGLPADWLKDDFELPKKP
PCIISVLCEIKEGLAVEAATMKEYSWRPVVKTFFEKGILKGNSDDLTGLLDIGNFDVNVK
SLNNLYETYVLSVGEFDERIFLGEHANEQIGTKNKVSGDEISQVIASFGPSARACPDTPL
TGRRYLARREELTPVSEATNSLARLAALLRHARPKPSPHLLRFFADCGVSEETINNNVVR
PCNGWMEQFSNNLKECNCSNETIAFRCNMVTCLYYKVFEHIIREEHRKKPQLSLQVLLSQ
ETYQLTVYACCTEVVLHAYGVHSLRFPRVLQIYGLSAFHFYKIIELVVQAVVEKLSRDVI
KHLNAVEEQVLESLVWTSDSPLWDQLSKIPVPASTEVYVQDSPNSRRNISGLQSPVSAVI
DRFLTPMADQAKKQLFKDNIKPGQSLLVQTNNNIKQEVTSPQSPPNATTSSAENTPNTTP
KKANNSLMLFFRKFYSLAVVRMNDLCTRLRLTDEELKRKIWTCLEYSIMHQTQLMKDRHL
DQILMCAVYVICKVSNTPTNQVERTFADIMRCYRQRPLADNHVYRSVLINKGNEEESPER
GDLINFYNKVYVKCMQNFALRFTGRHECSLSPLPAGRAARAGRWSPGGQRVSERHQLYVK
PLTTPPHHHHHLTYRFSRSPAKDLHAINTMVSCEVGGVKRPAEGGDVVKRARYAAPGVAR
KLQGLVSDRQAV
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacaagacgaaagtgaagataattggatcgcagctatggataatctatgttcg
aagttaaacgtagacccagtagctgcgaaaaaatcaaaagaatctttctcagaaataaaa
caaaattatacattagatggagacattttacactggatggcttgtgctttatacgtagca
tgtcgtacatccatcacccctacagttcagacaggtaaagctgtggaaggaaattgtgtc
agcctcacaagacttctcagactctgcaacataagccttatacaatttttcaataaaatc
aagaattggatggaaatggcttcaatgtcaacagattttaaagataggataacaagatta
gaacacaaatttgctgtatccacagtactctttagaaaatttcaacccatattccaagaa
attttctcaggtttgacaaatgagccagttaaaacgagcactaaaagtaaaaaacaaaag
ttacagccatgtacaacaaatgcattatttgaattcacatggtgtttatacgtttgtgtc
aagggagaatttcataactcagctgatgatcttgttgacatgtatcatgttcttttatca
tgtctggattttgcatttgccaatgctttcatggctcgtaggattgatttaatcaatcct
gctttcaaaggtctgccagccgattggctaaaggatgactttgagctaccaaagaaacca
ccatgcattatatcagtattgtgcgaaatcaaagaaggcttagctgttgaagctgctact
atgaaagagtatagttggagaccagtggtcaagactttctttgaaaaggggattttaaaa
ggcaatagcgatgatctcacaggcctgctagacataggaaacttcgatgtcaatgttaaa
tccttaaataatctctatgaaacatatgtactcagtgtaggggaatttgatgagaggatc
tttttaggtgaacacgccaacgaacagatcggaacgaaaaacaaagtatcgggggatgaa
atttcacaggtcatcgcatcgtttgggccgagcgctcgcgcgtgtcctgacactccgctg
acagggcggcgctacctggcgcggcgtgaggagctgacgccggtgtccgaggccaccaac
agcctggcgcgcctggcagcactgctgcgtcacgctcgccccaaaccctccccgcatctt
ctgcgcttcttcgctgattgcggtgtgagtgaagagacgattaataataatgtagtacgg
ccttgcaatggatggatggaacagttctcaaataacctgaaagagtgcaattgcagcaat
gaaactattgcattcagatgtaatatggtcacatgcttatattataaggtctttgaacac
ataataagggaggaacacagaaaaaagccccagttatcattacaagtacttctgtcacag
gagacctaccagcttacagtgtatgcatgttgtacagaggtggtgctgcatgcgtacggt
gtacactctctaaggtttcctcgagtcttgcagatatatggactgagtgcattccatttc
tataagattattgagctggttgtccaagctgtggttgaaaagctcagtagggacgtcatt
aagcatcttaatgcggtagaagaacaagttctagaatctctagtatggacatcagacagt
ccattatgggaccaactcagcaagattcctgttccggcctctaccgaagtttatgttcaa
gattcacccaacagccgtagaaatataagtggtttacagtctcctgtgtccgctgttata
gaccgtttccttactccaatggcggatcaagcaaagaaacagttattcaaagataatata
aaaccgggtcagtcgcttttagttcaaaccaacaataatataaaacaagaagtcacctcg
ccacagtctccaccgaatgcaacaacatcaagtgcagagaatactccaaacacgacgccc
aaaaaagccaacaactcattaatgctcttcttcagaaagttttacagtctggcagttgtc
cgaatgaacgacctttgcacccgactgcggctaaccgacgaggaattaaagcgtaagatc
tggacgtgtctcgaatattccataatgcatcaaacgcagcttatgaaggacaggcatcta
gatcagattttaatgtgtgctgtttatgtcatatgtaaggtttctaacacgccaactaat
caagtggagcgaacatttgcagacatcatgcgttgttaccgacagcgaccactcgccgat
aatcatgtgtatagatctgtattaatcaataagggaaacgaagaagaatctccagaacga
ggggatttaataaacttttataacaaagtatatgtgaagtgtatgcagaattttgctctg
aggttcacagggaggcatgagtgcagcctgtcgcctctgccggcggggcgggcggcgcgc
gcaggccgctggtctccgggcggccagcgcgtgtccgagcgccatcagctctacgtaaag
cctctcaccacgccgccccaccaccaccaccatctcacctaccgcttcagccgcagcccc
gccaaggacctgcacgcgatcaacacgatggtgtcgtgcgaggtgggcggcgtgaagcgc
ccggcggagggcggcgacgtggtgaagcgcgcgcggtacgccgcgcccggcgtcgcgcgc
aagctgcaggggctcgtcagcgaccggcaggccgtctga
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