Vanessa cardui (painted lady): 124537304
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Entry
124537304 CDS
T09161
Name
(RefSeq) ATP-dependent RNA helicase vasa
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcd03036
]
124537304
Enzymes [BR:
vcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124537304
Chromosome and associated proteins [BR:
vcd03036
]
Eukaryotic type
Gene silencing
piRNA pathway
124537304
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Utp25_C
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
124537304
NCBI-ProteinID:
XP_046970057
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All DBs
Position
18:complement(7382663..7392777)
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AA seq
611 aa
AA seq
DB search
MDDDWDDSCDIVVQPPPTINNFVDNNVDEGHSLSRGRGFPSFIEDNEDFNKGDSNGFGER
RGRGGRGGRGRGGRGGRGGNRDRGDYENGGDNYDNGERGDRHERGERGRGRGRGRGGRGG
GPRPNGGGEGEPTEGGEDEAKKAPVTYVPPEPTEVEEEIFSSTISSGINFDKFDCIAVKV
TGENPPRAIDSFETANLRKYVLDNILKSGYRKPTPIQKHAIPIIMGGRDLMGCAQTGSGK
TAAFLLPIINTLLQDPRELVTGPNGCAQPQVVIVAPTRELTLQIFNEARKFSYGSVLKIA
VAYGGTAVRHQGDNIARGCHILVATPGRLHDFVDRNRVSFDGIRFVVLDEADRMLDMGFM
PSVEKMMDHPTMVSLTERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGVVGGASTDVEQI
FHQVTKYEKQNMLKKLIEENDGKRILVFVETKRNADFIAAMLSEQQMLTSSIHGDRMQRE
REEALHNFKSGRHFILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRG
MAVSFFDSDQDVALVADLAKILRQAEQPVPDFLKGGGTATYKGNKYGGSDIRNFNNASTT
VDQGQEPDEEW
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgattgggatgattcgtgtgacattgtggtacaaccgcctccaactataaac
aactttgttgacaacaatgtggacgaaggtcacagcttgtccaggggcagagggtttcct
tctttcatcgaagacaatgaggactttaataaaggggacagtaatgggttcggcgagcgg
cgaggccgcggcggtagaggaggtcgtggtcggggggggcgcggggggcgcggtgggaat
cgcgaccgtggagactatgaaaatggtggtgataattatgataatggagagagaggcgat
cgccatgaaagaggtgaacgtggacgaggaaggggtaggggtcgtgggggaagaggaggt
ggtcctcgccccaacggtggtggggagggtgagcctacagagggaggcgaagatgaggcc
aagaaagccccagtaacatatgtccccccggaaccaacagaagttgaggaggaaatattc
agcagtacaatcagctctggaatcaacttcgataaattcgattgtatagctgtaaaggtg
actggagagaatcctcctcgtgcgattgacagtttcgaaacagcaaatcttcgaaaatac
gtgctggataacattcttaagtcaggatacaggaaaccaactcccattcaaaaacacgct
atccccatcataatgggcggaagagatttaatgggttgcgcccaaactggatcaggaaag
actgcggcattccttcttccgattattaatactcttctgcaagatcctcgtgagttggtc
actggtcctaatggatgcgcacaaccacaagtcgtaatagtggcacctacccgcgaatta
acactgcagatattcaatgaagccaggaaattttcgtatggttcagttttgaaaatagcc
gtagcgtatggtggtacagctgtacggcaccagggcgataatattgctcgaggctgtcac
atactggtagcaacgccgggacgtcttcatgattttgtcgatcgtaaccgcgtgtcattt
gatgggatacgatttgtagtgctggacgaggcagatcgtatgcttgacatgggtttcatg
cctagtgtggagaagatgatggaccatcctactatggtatctttaactgaacgacaaacg
ctgatgttctcagctactttcccagaagatattcaacacctagcaggtcgtttcctcaac
aattatctgttcgtggctgtcggtgtggtaggtggagccagtactgatgtggaacaaatc
ttccatcaagtcaccaaatatgaaaaacaaaatatgcttaagaagctcatagaagagaat
gatggcaagcggatactcgtgttcgtggagacaaagcgcaatgcggatttcatagcggcc
atgctgtcggagcaacagatgctgacgtcatccatccacggcgaccgcatgcagcgcgag
cgcgaagaggcgctgcataacttcaagagcggccgccatttcatcctcgtcgccacagcc
gtcgccgcgcgcggactcgatataaagaatgtggatatcgtcgtcaattacgatctccct
aagagcatagatgagtatgtgcacagaatcgggagaacgggtcgtgtcggcaataggggc
atggctgtgtcattctttgattctgatcaggatgtagccctagtagctgatctagccaag
attctgagacaagcagagcagcctgtaccagacttcttaaagggaggtggtactgccact
tataagggcaacaagtatggtggcagtgatattaggaatttcaacaatgcaagcacaacg
gtcgatcaaggccaggagccagacgaagagtggtaa
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