Vanessa cardui (painted lady): 124537361
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Entry
124537361 CDS
T09161
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcd03019
]
124537361
Messenger RNA biogenesis [BR:
vcd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
124537361
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF3730
Focadhesin
Motif
Other DBs
NCBI-GeneID:
124537361
NCBI-ProteinID:
XP_046970145
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All DBs
Position
18:750195..765693
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AA seq
1197 aa
AA seq
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MDEIEYKLKTNNSILIVNAVDKLISTIKSKYKPGERQKFVLENEELKYLRDKCASPDNMV
SLTACQGLLALVELGVLEIAHTMSTVVTLLPSTHNYSAIISTMAGLLVLDLKSRLIPGQQ
YKCQFSLKSPQHPFITVLEKNKDAEDDVLAQMHALCTHPEYTIASNSLELLRPVFLWLTC
SPHRSHSIRPWQLLLSLPQSDAQSKLLLSCISCQQVCNPKQIEQAYAAYSAVTDAAIYQQ
RREHVVALMPMLARVCAELVTHGRDPRGCYSLIERCCALDAPELKTVAGFTVMLLAQNLI
NTSALYLHELFNLCLNIISKYEFPSICLNSFVGLSLQWLHLPSYLTNNALKVASKIVDIH
QESKNTDTGLLIANLKSNATFQALVHVDKELYIYYKLLNTWERLRDNEDKLKSWIEGLMN
ANDQLKLELLTFFIGIVMDKHGNLDIVLKCIRLIIDLVRVKKEVSVTVLPVLLYKMANDM
RPSVKLECLKGLPLMATTKENVPALVAILNKLKVGRGVPISLLIKLYTSLAETQARCFPY
LQETLSENSPAELKWELDAARAQAVLRICELRPTSNGLELVSVISSLLTRCSDRAGAAAS
ALALAALAQLWCASAVAPPGAWRAIEPRLARDARPAVQVSLCNLLAEVPALRVPSADFDQ
LVREAARRLWQFVAEAHEPAVLGAACDALALYRVDDYKLRDIPEIYRRTVKLPPSYCKTP
ADAARKPEDVLDYVPCEVWPEVFKNSNQVALASVQRLVSKLMEREIKAYRSGVYATQPRE
PPSLAHLPPASPVRGLMECFRRQATSPSYDYPEAVLLAILGTLSADYPKPLPPLDFCFLH
EVFHRGHHWKAGCVKLAARQASTSVSAKRLIENFLQSIVPGRSEESDIMLFFENLPIFCR
TVPPNNIRTPLENCLTESFYQLPKSSQDPEELLFIKQLRIIKECLESDRIHDANRTLLSQ
IVENYFSLLDDDHLAWPAYLDTCGGLPTKHLERMTSPSGWWEVSGALLRRAGRVRAALAA
RSLVWLNELVDAHAACPPEQENFLRCILPALQAAKPDEQSTTDWFLQLLARTQVAFNETE
DETQKLFLCDVFFLSVVVFSGLWALEAEPGRSALRRALPPAAAALASRPAWRAAALPLLE
WLCHTRDTIREPSTAHCCQRALLALRHTEQFTTQKIWMRMEMNYGKTAIALEDSEAC
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaattgaatataaattaaaaacgaacaatagtattttaatcgtcaatgcagta
gataaattaatatcgacaataaaatcaaaatataagcctggggaacgtcaaaagtttgtg
ctagagaatgaagaattaaaatatttaagggataaatgtgcttctcccgacaatatggtg
agcttgacggcgtgccaagggctgctggccttggtcgagcttggggttctcgaaatagcc
cataccatgtcaacagtcgtcacattacttccaagtacacataactactcagcaatcatt
tcaacaatggccgggcttttagttctggatctaaagtcccgcttgattcccggacaacaa
tacaagtgtcagttctcactgaagtcaccgcaacacccattcataactgttctggaaaag
aataaagatgctgaggatgatgttttagcgcagatgcatgctctctgcacacaccctgag
tatacgattgcatcaaacagcttagaactcttaaggccggtgtttctctggctgacatgc
agtccacatcgaagtcacagcatcaggccatggcagttgctgttgagcttacctcagtct
gatgctcagtccaaactcttactttcctgcataagttgtcaacaggtctgtaatccaaag
caaatagagcaagcgtatgcagcttactccgcggtgacggacgcggcgatctatcagcaa
cgccgggagcacgtggtagccctcatgcccatgctcgctagggtctgtgctgagttagtg
acacacggacgcgacccgcgcggctgctacagcttgatcgaaagatgctgtgccctagac
gctcccgaactgaaaacggtcgccggtttcacagtcatgttgctcgcgcagaacttgatt
aacacctccgcgctgtatctacatgaattgtttaatctgtgtctcaatataatcagcaaa
tatgagtttccgtcaatatgcctgaactccttcgtcggactatcgctacagtggctccac
ctgccgtcgtatttaacaaacaacgccttaaaagtagcctccaaaatcgtggacatacat
caagaatccaaaaatacagacacgggccttctaatagcgaatttaaagtcgaatgcaact
ttccaagccctcgtccatgtcgataaagaactgtacatttattataagttgcttaatacc
tgggaacggttgagagataatgaggacaaattaaagagttggatcgaaggtttgatgaac
gcgaacgatcagctgaaattggagctgcttacattttttatagggattgtaatggacaag
catgggaatttggacattgttttgaagtgtataaggttgattatcgatttggttcgagtg
aagaaggaagtgtcagtgacggttttgccagttttactgtataaaatggcgaatgatatg
cggccgagtgtcaaattggagtgcttgaagggcttgccattgatggctactactaaagaa
aacgtgcccgcgctggtagcgatattgaacaagctgaaagttggaagaggcgtcccaatt
tctctgcttatcaagctctacacgagtctcgctgaaacacaggcccgctgcttcccgtac
ctgcaggagacgttgtcggagaactcccccgcggagctgaagtgggaactcgacgcggcg
cgtgcgcaggccgtgttgaggatatgtgagttacggccgaccagtaatggcctggagctg
gtgtcggtgatctcgtcgctgctgacgcgctgctcggaccgcgcgggcgcggcggccagc
gcgctggcactggctgcgctggcacagctgtggtgcgccagcgccgtggcgccccccggc
gcctggcgcgccatcgagccccgcctggcgcgcgacgcccgccccgccgtgcaagtcagc
ctgtgcaatctgctggcggaagtcccggcgctgcgcgtgccgtcggcggatttcgatcag
ctggtgcgcgaggctgcgcggcgcctgtggcagtttgtggcggaggcccacgagcccgcc
gtgctgggcgccgcctgcgacgcgctggcgctctacagggtcgacgactacaagctcaga
gacatacccgagatctaccgtcgcacagtgaagctgccgccgtcgtactgtaagacgccc
gccgacgcggctcggaaacccgaggatgtccttgactatgtgccttgcgaagtctggccg
gaggtgttcaagaactcgaaccaagtcgctctggcgagtgtgcagcgtctcgtcagcaag
ctgatggagcgcgagatcaaagcgtaccgcagcggagtgtacgccacacagccacgcgag
ccgccctcgctggcgcacctgccgcccgccagccccgtgcgtggcctcatggaatgcttc
cgcaggcaggcgacttctccatcctacgactacccagaagcggtccttctagccatactc
ggcactctctcagcggattacccgaagcctcttccacctctcgacttctgcttcctgcac
gaagtgttccacagaggccaccactggaaggcaggctgcgtgaagctcgcggcccggcag
gcgagcacgtcggtgtccgccaaacgtctgatagagaacttcttgcagagcatcgtgcct
ggacggagcgaggaatctgatataatgctgttcttcgaaaacctcccgatcttctgccgc
accgtgcctccaaacaacatccgaacacctctggagaattgtctcactgagtcattctac
cagctaccgaagtcgagtcaggaccccgaggagttgctcttcatcaagcagctgaggatt
atcaaggagtgcttggagtcggacaggatacacgacgccaacaggaccctcctctcgcaa
atcgtcgaaaactacttttctttgctcgatgatgatcacctggcgtggccggcgtacctg
gacacgtgcggggggctgcccaccaagcacctggagcgtatgacgtcaccgtcggggtgg
tgggaggtgtccggcgcgctgctgcggcgtgcgggtcgcgtgcgcgcggcactggcggcc
cgctcgctcgtgtggctcaacgaactcgtcgacgcgcacgccgcctgcccgccggaacag
gagaacttccttcgctgcatattaccggcgctgcaggccgctaagcctgacgagcaatcc
accacggactggttcctgcagctgctggcgcggacgcaagtcgcctttaacgagacggaa
gacgagacgcagaagctgttcctgtgcgacgtgttctttctaagcgtggtggtgttcagc
gggctgtgggcgctcgaggcggagcccgggcgctccgccctgcgtcgcgcgctgcccccc
gccgccgctgcgctcgcgtcgcgccccgcctggcgcgccgccgcgctgccgttactggag
tggctgtgccacacgcgcgacacgatccgcgagccgagcacggcgcactgctgccagcgc
gcgctgctggcgcttcgccacacggagcagttcaccacgcagaagatctggatgaggatg
gagatgaattatggaaagactgctatcgcgttagaagattcagaagcttgttaa
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