KEGG   Vanessa cardui (painted lady): 124537417
Entry
124537417         CDS       T09161                                 
Name
(RefSeq) negative elongation factor B
  KO
K15180  negative elongation factor B
Organism
vcd  Vanessa cardui (painted lady)
Pathway
vcd03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:vcd00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    124537417
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vcd03021]
    124537417
Transcription machinery [BR:vcd03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     124537417
SSDB
Motif
Pfam: COBRA1 RNA_pol_Rpb1_1
Other DBs
NCBI-GeneID: 124537417
NCBI-ProteinID: XP_046970209
LinkDB
Position
18:complement(5563055..5565081)
AA seq 589 aa
MASSSKLPGTGLEDVGVPGQTFLRDALTSCTDPLKAIEEFQLENGILLPSLRPMLPLLDL
HGVRRLDFHTSVLEELRDKLITHINEMGTTKDKKEHEKKLKELLLKSFPVVKVKALRPVI
MSILKNTSHIDDKFLKVLVRDRDLYNDTDTEVKRQIWQDNQSLFGDEVSPLLSQYIREKE
NVLFDHEKDSNMFFAPSPKVRRQGAVVQKLAHMIGTSVKLYDMVLQFLRTLFLRTRNVHY
CTLRAELLMALHDSEVQDIISVDPCHKFTWCLDACIRERNVDIKRSRELQGFLDSIKKGQ
EQVLGDLSMTLCDPYAVNFLATSAIKILQHLINTEGLPRDNTILILLLRMLALGLSAWEM
IDSQDFKEPKLDSQVVTKYLPALMSLMVDDQVRALHNKLPPDERESAITTIEHSGPPPDA
CEAYMRESAVCGVLAMYYTLHAAKLRDRGAILRILSILGSCKDGRAYEDPFLHALVALLI
QLPDEFQGEDFSTVLFDEFFFAGLSKDNVTRHLLKLLWYIHPKLPETRIQTLMKALQPGT
QHNESVHKLYETLQQKMNTQTEPALNTTEMEYLDSPLMSVPTPAPFHNI
NT seq 1770 nt   +upstreamnt  +downstreamnt
atggcttcatcaagtaaattacctgggactggattagaagatgtaggagtacccggtcaa
acatttctccgagacgctcttacaagttgtacagacccattaaaagcaatagaagagttt
caactagaaaacggtatattactgccctctttaaggcctatgctacctctattagatctt
cacggtgttcgcagactcgattttcatacatctgttttagaagaattaagagataaacta
attacacacataaatgagatgggtactactaaagataaaaaagaacatgaaaaaaaactt
aaagaacttttactgaaaagttttcctgttgttaaagtgaaggctctaaggcctgttatt
atgagtatcttgaaaaatacatcacatattgatgataagtttttaaaagtgctagttcgc
gacagagatctctacaatgacacagatacagaagttaaaagacaaatatggcaagacaat
caatcattatttggtgatgaagtgtcaccattacttagtcaatacataagagagaaagaa
aacgtattatttgatcatgagaaagattctaacatgttctttgcaccttcaccaaaagtg
agaagacaaggtgctgttgtacaaaaactggcacatatgattggaacaagcgttaaactc
tatgatatggttttacagtttcttcgcacattgtttctacgaacaaggaatgtacattac
tgcacattaagagctgaacttctaatggcgcttcatgattctgaagtacaagatattata
tctgttgacccctgtcacaaattcacatggtgtctggatgcatgtattagggagagaaat
gtcgatattaaaaggtcacgagaactacaaggtttcttagacagtataaaaaaaggtcag
gaacaagttctgggagatttatcaatgacattatgtgatccatatgcagttaacttcttg
gcaacatcggccattaaaattttacaacatttaatcaacacagaaggacttccaagggat
aatacaatattaattttattactaagaatgctggcattaggtctaagtgcatgggagatg
attgattcacaagattttaaagagcctaagctagacagccaggtggtaactaagtatctt
cccgccttaatgtctctcatggtggatgatcaagtccgtgctttacataacaaacttcct
ccagatgaaagagaatcagctattacaaccattgaacattctggacctcctcctgatgcc
tgtgaagcatacatgagggagagtgccgtttgtggtgtattggctatgtactatacactc
catgctgctaaactaagagatagaggagcaatccttagaattctcagtattttgggaagt
tgcaaagatggcagagcttatgaagatccatttttacatgcccttgttgctttactaata
cagctgccagatgaattccagggggaagacttcagtaccgttttattcgatgaatttttc
ttcgctggtttatctaaagataatgttacgagacatctgttaaaattgctatggtacata
cacccaaagttgccggaaactagaattcagactttaatgaaagctttacagcctggaacg
caacataatgaatctgttcataaattgtatgaaactttacaacaaaaaatgaatactcag
acagaaccagctcttaatactactgaaatggaatatttggattctcctcttatgagtgta
cctacaccagcaccctttcataatatatag

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