Vanessa cardui (painted lady): 124537508
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Entry
124537508 CDS
T09161
Name
(RefSeq) enhancer of mRNA-decapping protein 3
KO
K12615
enhancer of mRNA-decapping protein 3
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124537508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcd03019
]
124537508
Messenger RNA biogenesis [BR:
vcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124537508
mRNA degradation factors
5'-3' decay
Decapping complex
124537508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FDF
LSM14
YjeF_N
Motif
Other DBs
NCBI-GeneID:
124537508
NCBI-ProteinID:
XP_046970336
EnsemblRapid:
ENSVCAG00000013586
LinkDB
All DBs
Position
18:51529..54715
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AA seq
481 aa
AA seq
DB search
MSKWIGYAVSVNCGDPLGCYQGTILEADGTTITLTKAFRNGFPYPKSQVTLNAADIKDLK
IIEEATSKPAEQTHSTVAVTKNNKKGQRATVCENLQANPSHSGNQQNVSNITNKSAPSRG
ALPVPTRSKPIDIQPTRSNKNNHSGSYGNTGSTPKGRSGPFHEKARRRNEACFGDTADPA
LDDDFDFEGNLALFDKQALWEEMRSAARPDVVRAADEAARFRHDENVLGAAPALPAIRLP
DELRGPVVYSADDGRRVPSAAPRLRRDFWDAMRRCGLLDGALTLLARAAADVALRLAGGG
RRLEARNAHQAPVAVVLAGAHRLGAAGLEAARVLAAHGVRAHVLLAGGAGGAGECAALRR
ERGALALCGVAAHASAAALPAPDVVLLALYDPLLDDAQERHAAALAWVRGARAAVVAVEP
PGAGWDGVCARASLLAGLPAALPPALGRVYLANVAPPASLFRELRVAYRPPFGAASVLAL
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagtggattggttacgccgtgtccgtcaactgtggtgacccattgggctgctat
cagggtacaatattagaagccgacggtacaacaatcacactgacaaaagcatttagaaac
ggctttccttaccctaaatcacaagtcactttaaacgcagctgatattaaggatctgaaa
ataattgaggaagcaacatcaaaaccggctgaacagacacacagtacagtagctgtaaca
aagaataataaaaagggtcaaagagccactgtttgtgaaaacttgcaagccaatccgtca
cactccggtaatcagcagaatgtaagcaatattactaataagagtgcaccttcccgaggt
gcgctgcccgtgcccactcgcagtaagcctattgacatacagcccacgagaagtaacaaa
aacaatcattcaggaagttatggcaatacaggctctacacctaaaggtcgaagtggcccc
tttcatgagaaagcacgacgtcggaacgaggcctgttttggagatacggccgaccccgct
ctcgatgatgactttgacttcgagggcaaccttgctctcttcgacaaacaagcgctgtgg
gaggagatgcgctcggcggcgcggcccgacgtcgtgcgcgccgcggacgaggcggcgcgc
ttccgccacgacgagaacgtgctgggagccgcgcccgccctgcccgccatccgcctgccc
gacgagctgcgcgggcccgtcgtgtacagcgccgacgacggccgccgcgtgccctccgcc
gcgccgcgcctgcgcagggacttctgggacgccatgcggcgctgcggcctgctcgacggc
gcgctcacgctgctggcgcgcgccgccgccgacgtggcgctgcgcctcgcgggcggcggc
cggcgcctcgaggcgcgcaacgcgcaccaggcgcccgtggccgtcgtgctggcgggcgcg
caccgcctgggcgccgcggggctggaggcggcgcgcgtgctggcggcgcacggcgtgcgc
gcgcacgtgctgctggcgggcggcgcgggcggcgcgggcgagtgcgcggcgctgcggcgc
gagcggggcgcgctggcgctgtgcggcgtggcggcgcacgcgagcgcggcggcgctgccg
gcgcccgacgtggtgctgctggcgctgtacgacccgctgctggacgacgcgcaggagcgg
cacgcggcggcgctggcgtgggtgcgcggcgcgcgcgcggccgtggtggcggtggagccg
ccgggcgcgggctgggacggcgtgtgcgcgcgcgcctcgctgctggcggggctgccggcc
gcgctgccgccggcgctgggccgcgtgtacctggccaacgtggcgccgcccgccagcctg
ttccgcgagctgcgcgtggcgtaccgcccgcccttcggcgccgcctcggtgctggcgctc
gactga
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