Vanessa cardui (painted lady): 124537654
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Entry
124537654 CDS
T09161
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124537654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcd03041
]
124537654
Spliceosome [BR:
vcd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
124537654
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
DUF6382
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
124537654
NCBI-ProteinID:
XP_046970511
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Position
2:3589482..3593023
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AA seq
487 aa
AA seq
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MMNEERAKKRKLSDDENGIDSSELPIKNSITSIQCPYLDTINRHVLDFDFEKLCSVSLTR
INVYACLVCGKYFQGRGTNTHAYTHSVAESHHVFLNLHTLKFYCLPDNYEVIDSSLNDIK
YVLNPIFTPDQIKQLDQSTKMSRAIDGTMYMPGIVGLNNIKANDYCNVILQCLSQVRPLR
NYFLREENYAGVKRPPGDSSFLLVQRFGELLRKLWNPRAFKAHVSPHEMLQAVVLWSKKK
FQFIKQSDPIDFLSWFLNSLHIALNGTKKPNSSIIYKSFLGHMRIYTRKLPPPDADDAAK
VDLNSEEYSEMITESPFLYLTCDLPPTPLFTDEFRENIIPQVNLYQLLSKFNGQTSKEYK
TYKENFLKRFEITQLPPYLILYIKRFTKNTFFVEKNPTVVNFPVKNVDFGDILTPEIKEK
HNGKTTYELVGNIVHDGTPEKGTYRAHVLHTPTQQWYEMQDLHVTSILPQMITLTEAYIQ
IYELKQD
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgaagagagagcaaaaaaacggaaattgagcgatgatgaaaatggtatagac
tcttcagagctgcccattaaaaactcaataacatctattcaatgcccgtatttggataca
ataaaccggcatgtattggactttgattttgagaaactatgttcagtatctcttaccaga
ataaatgtgtatgcgtgtctggtgtgtggtaaatacttccagggtagaggtacaaacaca
catgcatatacacattcagtggccgaaagtcatcatgtctttcttaatttgcatacttta
aaattttactgcttgccagacaattatgaagttatagattcttctctaaatgatatcaag
tatgtgttgaatccaattttcacaccagaccagataaagcagttggatcagagcacaaaa
atgtctagagcaatagatggtacaatgtacatgccaggtattgttggtctaaacaatatc
aaggctaatgattactgcaatgttatattacagtgtttgtcacaagtccggccgcttcgt
aattattttttgcgagaagagaactatgctggtgtaaagagaccaccaggagattcatca
tttttgttagtgcagagatttggggagctcttacgaaaactttggaatcctagagcattc
aaagcacatgtttctcctcatgaaatgttacaagctgtagtgctttggtccaagaaaaaa
tttcagtttattaaacaaagtgatccaatcgattttctttcatggtttctcaattcctta
cacattgctcttaatggaacgaagaaaccaaatagttcaataatatacaagtcatttctt
ggtcatatgagaatatatacaaggaagttgccacctccagatgcagatgatgcagctaag
gtagatcttaatagtgaagagtactcagagatgataactgaatctccattcctttatttg
acttgtgacttaccaccaactccactgtttactgatgaattcagagaaaatattattcct
caggttaatttgtatcaacttctgtccaagtttaatggacaaacatccaaggagtataaa
acttataaagaaaactttttgaagagatttgaaattactcaacttccaccctatttgata
ctgtatatcaagcggtttactaagaatacattttttgttgaaaagaatccaactgttgtg
aattttcctgtcaaaaatgttgattttggtgatattctaacaccagaaataaaggagaag
cataatggaaaaacaacatatgagttagttggcaacatagtgcatgatggtactccagaa
aaaggaacatatagggctcacgttctacacacgcctacacaacaatggtatgaaatgcaa
gatcttcatgtaacaagtattttaccacaaatgatcactctcactgaagcttatatacaa
atatatgaattaaagcaggactaa
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