Vanessa cardui (painted lady): 124537658
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Entry
124537658 CDS
T09161
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 isoform X1
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vcd04040
]
124537658
Ion channels [BR:
vcd04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
124537658
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GFIT
Motif
Pfam:
Ion_trans_N
cNMP_binding
Ion_trans
Ion_trans_2
IFT20
Motif
Other DBs
NCBI-GeneID:
124537658
NCBI-ProteinID:
XP_046970512
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Position
18:4697363..4952866
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AA seq
782 aa
AA seq
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MSLRSLHRRLSSANNTCEDGGGGAATGTGGRAASLRLANGRVAAQSAEQLPHSPADCNSV
RISIDNTNTCCTDSLVTALDDETLLLGDADMSLKQGSGTGKVHFGGLDDVSLYGTPVEPA
PPAPDAKQGFLRNQLQALFQPTDNKLAMKLFGSKKALMKERIRQKAAGHWVIHPCSSFRF
YWDLCMLLLLVANLIILPVAISFFNDDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDN
AEQVILDPKLIAKHYLRTWFFLDLISSIPLDYIFLIFNQVNDFSESFQILHAGRALRILR
LAKLLSLVRLLRLSRLVRYVSQWEEVYILQNLQKKRTERRGRLSSDVAKKKGDTKSNLIF
KFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPPNSWVAINELQEAFWLEQYS
WALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQ
YREKVKQVEEYMAYRKLPREMRQRITEYFEHRYQGKFFDEELILGELSEKLREDVINYNC
RSLVASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGNKMYFIQEGIVDIVMAN
GEVATSLSDGSYFGEICLLTNARRVASVRAETYCNLFSLSVDHFNAVLDQYPLMRRTMES
VAAERLNKIGKNPNLVAHREDDTTSEGNTINAVVNALAAEAEHVSLSDDSVARLSERSLG
LALQPLQAASCRMAGVALPGLGVAAALPRPKSEHDFSSAQAQQPPLASAAAAFHKSDAGI
AP
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgcgcagcctacaccggaggctctcctccgccaacaacacatgcgaagatggt
ggaggcggcgcggcgacaggcacgggcgggcgtgcggcgtcgctgcggctcgcgaacggg
cgggtcgcagcgcagtcggcggagcagctaccgcactcgcccgcggactgcaactccgtg
cgaatatccatcgacaacaccaacacatgctgcaccgactcgctcgtcacagcgctcgat
gacgagaccctactgcttggcgacgccgatatgtcgctgaagcagggcagcggcaccggc
aaggtccacttcggtggtttggacgatgtgtccctgtacggcacacccgtggagcccgcg
cccccggcccccgacgccaagcagggtttcctgcgcaatcagctgcaggccctcttccag
cctaccgacaacaaattagccatgaagctcttcggttccaaaaaggccctaatgaaggag
cgcatcaggcagaaggcggcaggacattgggtcatccatccgtgcagtagttttaggttc
tactgggatctatgtatgttattgttactggtggccaacctcatcattcttcccgtcgcc
atctccttcttcaacgacgaccttagcacacgatggatagcgtttaattgtctatcagac
accatatttcttatagatatcgttgttaattttagaacaggaataatgcagcaagataat
gcagaacaagtgatattagatccaaagttaatagcgaagcactatttgaggacatggttc
ttccttgacctcatctctagtataccactagattacatattccttatcttcaatcaggta
aacgattttagtgaaagctttcaaattcttcacgccggtcgtgccctaaggatactacgg
ttagcaaaacttttatcgctggttcgactgctcagactttccaggctcgtccgatatgta
tcacaatgggaggaagtatatatcttgcagaatcttcaaaaaaagcgcacggaaaggagg
ggacggctcagctccgacgttgcaaaaaagaagggtgacaccaaaagcaatctgatcttt
aagttcctcaatatggcatcggtgttcatgcggatatttaacctgatctgcatgatgttg
ttgatcgggcactggtctggatgtctacaatttctcgttccaatgctgcaaggatttccc
cctaattcttgggttgcaataaatgaattacaggaagccttctggctcgagcagtactct
tgggcactctttaaggctatgtcccacatgctgtgcattgggtatggccggtttcctccg
cagtccctcacagacatgtggctcacgatgctttctatgatctccggtgcgacttgttac
gctcttttcctcggtcatgccacaaatcttattcagagtctcgactcatcacgcagacaa
tatcgtgaaaaggtgaagcaagttgaggagtatatggcttatagaaagctacctcgcgaa
atgcgtcaacgcatcacggagtatttcgagcaccggtatcagggaaaattcttcgacgag
gaattgattttaggcgaattaagcgaaaaattgcgagaagacgttatcaattacaattgt
cgatcgcttgttgcttcggtgccatttttcgcaaatgctgactccaattttgtctcagac
gtagtcaccaaattgcgttatgaagtcttccagccgggtgatattatcataaaagagggt
accatcggaaataaaatgtacttcattcaagaaggcatcgtcgatattgtgatggcaaat
ggcgaagttgcgaccagtctctctgatggatcgtacttcggtgaaatctgcctgctgacc
aatgcccggcgagttgcttccgtccgcgccgaaacttattgtaatcttttctccttatct
gtggaccatttcaacgcagtactcgatcagtatcccctgatgcggcgcaccatggaaagt
gtagctgccgaacggctgaacaagatcggtaaaaatcctaacctggtagcgcatcgggag
gatgacacgacgtcggaagggaacacgatcaatgccgtcgtaaacgcgctagcagcggaa
gcagagcacgtgagcctgtcggacgatagcgtggcgcggctgtccgagcggtcactgggg
ctagcgctgcagccgctgcaggcggcgtcgtgccgcatggcgggcgtggcgctgccgggc
ctgggcgtggcggcggcgctgccgcgtcccaagtccgagcacgacttcagctcggcgcag
gcgcaacagccgccgctggcgagcgccgcggccgcattccacaagtcggacgcggggatc
gccccctga
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