Vanessa cardui (painted lady): 124537688
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Entry
124537688 CDS
T09161
Name
(RefSeq) guanine nucleotide exchange factor subunit Rich
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcd04131
]
124537688
Membrane trafficking [BR:
vcd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
124537688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_WDR35_TULP_N
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
124537688
NCBI-ProteinID:
XP_046970571
LinkDB
All DBs
Position
18:complement(3662636..3706767)
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AA seq
1410 aa
AA seq
DB search
MYFPIGWPKVLKNLGTDTQLIKQIVSNRDKVLFASLCDESLAVWFCKPTVPVVYHKRSAE
SLQRLGVNVCVEWKPDSSMICVSTSEGHLILYNVESQNDHTAYQQCDPPTASLRRDSAEL
FVKEVIPSLKITLFKEILVWDGQITRMCCISGTEILVCTTRAHLLRYRWDGTQNRDYCLD
LGRIPFSINQQVSKAEPILEDNTHVNDIEYSPLVCGFGITLNDGRAAYLTAPNLKFDPNA
VQGIWAQGIDDATCVRVNHKFRLIAIGRKNSQIDVFTIDEATGGLELSHTMVLSSKDFPG
DPGPVKCMRWSGEGRAVAASWERGGVSVWSTFGALLMCSLAWDYGLSQDLARHNPLVVSS
MEWATEGYQLWMVKVEEESKSNLIQMDFVKSPLSVNPCMSNQRHLYLQADDKLYVNLEDN
LTRRTKIPIIDSSSDAFQENGQDHPLEYDSSAKYKEFVDDNECRKQWIVLQLPATYIATN
WPLRFSAVDSSGQHVCVAGRAGLAHYSCAARRWKLFGNEAHERDFVVAAGVLWWRDYIVA
GCYSITDGHDEIRFYPRDAKLDNKFAKIVRVQAQVLVLDILDDQLVVFGADALVTIYELN
RIDNSGGVEVRCVQAVDISALAHPACVVSASLCRLQDAPPAHLARPARAHPPHAPDSLVI
NASGKLMMVQREEYDVDEDNNPAYSCLPATVLASCVESVWSGSGSGAQTQLSRALWLWCG
ALGARVWLPLMPREVTRRTDPSRHTFMAKRIMLPFHLDIYPLTILFDDAILLGAENDTTL
YASDSNSVFSLPFCVINRTSQVYLHQILRQLLRRNLGYHAWEIARSCSQLPYFPHSLELL
LHEVLEEEATSKEPIPDAQLPSVIEFVHEFPVYLQTVVQCARKTEIALWAYLFSAAGKPK
ELFQECLQRKMLDTAASYLIILQNLESSTVSRQLATQLLDTALQQERWDLARDLVRFLRA
IDPNDVDSPRNSINVQTKYGQIVQSQSVSPNAEDLSVILGSMQERLQLGGARGRSFSTTA
APREPSPPAAHAPRRSAATAAVKRKKSVPARSDRDTYNGTAEEFFIDMMIQRHARLLLST
ARLLALGRLAAALDLHLVAWLAGERERAARVDAAVPCLRRLHDDFGWPYPAPDDADYPQR
KTSMVPAPCSPAAECESLCGDSGYVSLSLRNALPLAAGAPLSPAPLSSVGEGSVAEGGGV
AWGGAGDAADAAPDERRYAALMERLHHTQAERGDHTAHVQLRYLLQLMTEASCVEWALVV
AVALRDALAVLRCANAARGPDVSLEAALRLRAALADLRAWTDAECIGYRPFMMAISNQIP
YLTSIINARERRASLAQSRARTPSTSSLTEQKQTPQEPKLPPPQKAQEVSKQSVRKDSPS
SMPEPESEVLVPARPPLPSREEPASNCAIM
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgtattttcccataggatggccaaaagttctaaaaaacttaggaacagatactcagtta
attaagcaaatagtgtcgaaccgagataaagtcctgtttgcatctttatgtgatgaaagt
ttagccgtctggttctgtaagccaactgtacctgtagtgtatcataagaggagtgcagaa
tctctacaaagacttggtgtcaatgtgtgtgtggaatggaaaccagattcatctatgata
tgtgtttctacttcagaagggcatttgattttatataatgtagaatcacagaatgaccat
actgcatatcagcaatgtgacccacctacagctagtcttcgaagggactctgcagaatta
tttgttaaagaagttataccatctttgaagattaccttatttaaggagatccttgtgtgg
gatggacaaataactaggatgtgttgtatatctggaacggaaattcttgtgtgcacaaca
agagctcatttacttcgatatcgctgggacggaacacagaatagagactactgccttgat
cttggtcgaataccattttctataaatcagcaagtgtctaaagcggaaccaatattagaa
gacaacacacatgttaatgatattgagtactccccacttgtttgtggttttggcataaca
ctgaatgatggaagagctgcctatctaacagcaccaaatctaaagtttgatccaaatgca
gtacaaggtatttgggcacaggggattgacgatgcgacgtgcgtacgagttaatcataaa
ttcaggctcatcgctattggtagaaagaattcacagattgacgtcttcacgatagacgag
gcgacaggtggtttagagttgtcacatacgatggtcctcagttccaaggatttccccggg
gacccggggcccgttaaatgtatgaggtggagcggcgaggggcgcgcggtggcggcgagc
tgggagcgcggcggcgtgtcggtgtggagcacgttcggcgcgctgctcatgtgctcgctg
gcgtgggactacggcctcagccaggacctcgcgcgccacaacccgctcgtcgtctccagc
atggaatgggcgacggaaggctaccagttgtggatggtaaaagtcgaagaagaatcgaaa
tcaaatctcattcagatggacttcgtgaagagtccgctcagcgtcaatccttgcatgagc
aatcaaaggcatctatacctccaagctgacgacaaattatacgttaatttagaagataat
ctcacccgtcgaacgaagatacccataatcgattcgtcgtcggacgcgttccaagagaac
ggccaagaccatccgctggagtacgacagcagcgccaagtacaaggagttcgtggacgac
aacgagtgcaggaagcagtggattgtgttgcagctgccggccacgtatatcgctaccaac
tggcccttgcggttcagcgcggtggacagcagcgggcagcacgtgtgcgtggcggggcgc
gcggggctggcgcactacagctgcgccgcgcgccgctggaagcttttcggcaacgaggcg
cacgagcgcgacttcgtcgtcgccgccggcgtgctctggtggcgcgactacatcgtcgcc
ggatgttacagcataacggacggtcacgacgagatccggttctacccgcgagacgcgaaa
ctcgacaacaagttcgcgaagatagttcgcgtgcaggcgcaggtgttagtgctcgacatt
ctcgacgaccaactcgtagtgttcggcgcggacgcactcgtcaccatatacgaactgaac
aggatcgataacagcggcggcgtggaggtgcgctgcgtgcaggcggtcgacatctcggcg
ctggcgcaccccgcgtgcgtggtgtcggcgtcgctgtgccgcctgcaggacgcgccgccc
gcgcacctcgcccgccccgcgcgcgcacacccgccgcacgcgcccgactcgctggtaatc
aacgcaagtggaaaattaatgatggtgcaaagagaagaatatgacgtagatgaagacaat
aatccggcatacagctgtctgcctgcgacagtcctagcctcatgcgtggaaagcgtatgg
tctggcagcggctcgggtgctcagacgcagctgtcgcgtgctctatggttgtggtgcggc
gcgctcggcgcccgcgtgtggctgcccttaatgccgcgcgaggtgacgcgacgcactgac
ccttcgcgacacaccttcatggctaaaaggataatgctgcctttccatctggacatatac
ccgctaactatactcttcgacgatgcaatactattgggtgctgaaaatgatacgacttta
tatgcatctgactcaaattcggtgttttctctgccattttgtgtcattaacagaacgagt
caagtatacttgcaccaaatacttcgccaacttctccgacgtaacctgggatatcacgcc
tgggagatagctcgttcgtgctcgcagctgccctacttcccgcactcgctggagctgctg
ctgcacgaggtgttggaggaggaggccaccagcaaggagcccatacccgacgcgcagctg
cccagcgttatcgaattcgtgcacgagttcccggtttatttacagacggtggtgcaatgt
gcgaggaagacagaaatagcgttgtgggcgtacttgttctccgccgccggcaagcccaag
gaacttttccaagagtgcttgcaacgtaagatgctggatacggccgcctcctatctcatc
atattacaaaatctagaaagttcgacggtaagccgacagctagcgactcaactgttagac
actgcgttgcaacaggagcggtgggacctcgcgagagatcttgtgcgtttcctaagagcc
attgatccaaacgacgtcgattctccgagaaactcgataaacgttcaaacgaagtatgga
cagatagtgcagtcgcagagcgtcagcccgaatgctgaggacctgtccgttatactcgga
agcatgcaggaacgcttgcagctgggcggcgcgcgcgggcgcagcttcagcacgacggcg
gcgccgcgcgagccctcgccgcccgccgcgcacgcgccgcgccgcagcgccgccaccgcc
gccgtcaagcgcaagaagtccgtgcccgccaggagcgacagggacacgtacaacggcacg
gcggaggagttcttcatcgacatgatgatccagcggcacgcgcgcctgctgctgtcgacg
gcgcggctgctggcgctgggccggctggcggcggcgctggacctgcacctggtggcgtgg
ctggcgggcgagcgcgagcgcgccgcgcgcgtggacgccgccgtgccctgcctgcgccgc
ctgcacgacgacttcggctggccctaccccgcgcccgacgacgccgactacccgcagcgc
aagaccagcatggtgccagccccgtgcagcccggcggcggagtgcgagagcctgtgcggc
gacagcggctacgtgtcgctgtcgctgcgcaacgcgttgccgctggcggccggcgcgccg
ctgtcccccgcgccgcttagctcggtgggcgagggcagcgtggcggagggcggcggcgtg
gcgtggggcggcgcgggcgacgccgccgacgccgcgcccgacgagcgccgctacgccgcg
ctcatggagcgcctgcaccacacacaggccgagcgcggcgaccacaccgcgcacgtgcag
ctccggtacctgctgcagctgatgacggaggcgagctgcgtggagtgggcgctggtggtg
gcggtggcgctgcgcgacgcgctggccgtgctgcgctgcgccaacgcggcgcgcgggccc
gacgtgtcgctggaggccgcgctgcgcctgcgcgccgcgctcgccgacctgcgcgcctgg
accgacgccgagtgcatcggctacaggccgttcatgatggcgatcagcaatcaaatcccg
tatctcacgtcgatcatcaatgcgcgcgaacgccgcgcctccttagctcaatctcgagca
agaactcccagtaccagttctctcacagagcagaagcaaactccccaagaaccaaagcta
ccccctccgcagaaggcccaagaggtatctaagcagtcggtaaggaaagattctcccagc
tcaatgccagaacctgaatcagaagtcctcgttccggcgagaccaccgctaccatcacga
gaagaaccggcctccaactgtgccataatgtaa
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