Vanessa cardui (painted lady): 124537701 Help Entry 124537701         CDS       T09161                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism vcd  Vanessa cardui (painted lady) Pathway vcd04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:vcd00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     124537701  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:vcd00536]     124537701 Glycosaminoglycan binding proteins [BR:vcd00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    124537701 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Laminin_G_3 Laminin_G_2 Laminin_G_1 Motif Other DBs NCBI-GeneID:  124537701 NCBI-ProteinID:  XP_046970577 LinkDB All DBs Position 2:complement(5031370..5047724) Genome browser AA seq 1754 aa AA seqDB search MALEMKGLLLILFCVLCVGSGNESLEIFDVLSVVQDGALPEGVTRVPGRCQSPGTPETES TAFSLNENATLHQLSAGMFFNTFPEDFSILAVVRLSGTDQNPLFVLYSDAGDEQLQLVIG ELIELYYEDTRGQPEDHELLTYRVNIADEKWHRVAVSVKGDSVTLLVDCEIRGTLPLRRH PGSTFNLAGVLVVGTQVTPDQYYEGDIELLQFANQPDLAYDMCVAVAPDCGSFGSYDYES LNSVHEFDKVPDYSATQSSVNENERYDQFGQRLFTNKNQSETLWAAASRELTTARPYWQV PDSYGFTVPYPVSTDDDENSIFGRFTDTDEYIPTPSSIEVSPTGASGIVTVTGKRDIDSD TEGPTLTTTESSYPFITTTEDTDWLTHPPNFGEGNVSTRYDTSDSYYDYGSTGTYMGPRG YPGPPGPQGPRGPKGEPGKPGGEGQQGFPGAPGHVFVVPLQQPGNEKGPDAQSEALRQIL TQHMAAMRGAEGPMGLTGPPGPEGDIGPEGTKGEPGDQGEPGPPGPRGLQGPPGRLGRRG HAGRDGERGSPGPPGQKGEQGYPGQAGMPGDKGERGTPGQQGEAGAPGLDGPPGDDGPPG PPGLSGELGPRGFIGPRGFPGLIGYPGIPGNEGPQGTKGAAGQPGSPGSPGQPGPMGPAG SPGPQGSIGAPGIQGPQGKPGISGLPGPEGSPGTPGTPGQQGSPGEVGSPGPQGMLGFPG PRGLKGEDGPRGLSGDKGDKGIRGLEGEKGEMGPKGERGLVGESGPPGIEGPEGQKGTEG PRGETGSIGPSGEKGATGPQGPSGYPGTQGEKGDKGAAGRRGRRGTKGIMGLIGIPGDRG EGGPRGYRGPRGRRGSDGPPGPKGDTGQPGPPGSVGERGPQGLEGPRGFPGNMGPPGTDG KPGLPGTPGERGPTGETGSSGLPGPPGLTGPQGQNGDPGPPGLQGPSGIPGTPGEMGAPG EMGKDGPPGPSGPEGKPGPVGPPGSPGPNGEPGLPGVPGTPGSKGDLGPPGPPGVRGDKG EQGEAGREGLQGPMGREGPRGAPGPGGQKGEIGEPGPMGTVGRDGLPGPRGLTGTPGPVG PPGEDGDKGDAGPPGEKGFKGAMGEPGPIGSPGIQGLRGEPGPVGLPGDKGPQGDPGPPG TPGTDGARGPPGPAGKTGPEGSKGDQGVKGDRGDNGPIGPPGPAGLTGPPGRRGAKGNQG EQGLRGPEGEQGEVGSPGATGPQGPQGPEGKIGPRGPVGPKGEDGPPGLQGETGSKGLPG PEGSKGDPGPSGFPGDRGEPGPQGIKGEPGSDGPEGSTGPPGPPGPTGPIGKPGETGVPG SPGTEGPAGAQGSPGLPGEKGDTGPKGSPGDIGPAGAIGLTGPEGQRGLRGLPGPPGDVG PPGLMGPSGAPGTSGPPGLQGIKGDKGNRGPKGHIGETGPMGIKGDQGEIGKQGPQGLTG PAGTKGDMGPIGPAGAKGDIGPIGPVGPEGPLGPKGSPGPEGRPGLPGPPGAPGPPGPPA IAPQLPAGLFMSSRKRRSIDEESTETATEDIFDDVEEVEWAHEIMSGVIAARTAVETAKK PWGTRSNPALSCKDLRTSHVNLTDGFYWVDARGGSGRPIRVYCKEHNTCLFPDHMSPSLY SDATAHKFSQIENGFRITYDGEGSGSIQLRFLRLLSNGARQNFTYNCVNTQAPQRSDIPV DLTRVNELKLFGQNNVEFKEPKIIKDDCKDGTGEIVLEVKTSRSDRLPISDFQPLSFVDA EHEFSFTAGPICFN NT seq 5265 nt NT seq  +upstreamnt  +downstreamnt atggctcttgaaatgaaagggctcctccttatattgttttgcgtactctgcgttggatct ggaaacgaaagtctcgaaattttcgacgtactatccgtggtgcaagatggagcattaccc gaaggagtaacacgagtgccaggccgatgtcagtcgcctggcactcccgaaacagaatct acggccttctccctcaacgagaatgcgaccctgcaccaactatcggctggaatgttcttt aacacgttccctgaagacttctcaattttagcagtagtacgtctatcgggtacagaccaa aaccctcttttcgttctgtattcggatgccggcgacgaacaattgcaattggtcattggt gaactcatagagttgtactacgaggatacgcgaggccaacctgaggatcacgagctgctc acatatcgagttaatattgccgacgaaaagtggcatagagtggcagttagcgtaaagggc gattccgtaacattactcgttgactgcgagatcagaggcacgttgcctctgaggcgacat cctggcagcacctttaatttagctggagttttagtcgtcggtactcaagtaacacccgac cagtattacgagggcgatattgaattgctccaattcgctaatcaaccggacctcgcgtat gacatgtgtgtagcagtagcaccagattgtggatcatttggatcgtatgactatgagtca ttgaattctgtgcacgaattcgataaagtacctgattactccgctacacaatcgtcggtt aacgaaaatgagagatatgatcaatttggacaaagattattcactaataaaaaccagtca gagaccttatgggcagctgctagcagagaactgacaacagcgaggccgtattggcaagtg ccagattcttatggttttactgttccctatccagtttccactgacgacgatgaaaacagc attttcggaagatttactgacaccgatgaatacatacctacaccttctagtattgaagtc agtcccactggagcatccggtattgtcaccgttacggggaaacgagatattgacagcgat acggaaggccccacactaactacgacggaatcatcctatccattcatcacaacgaccgaa gatactgactggctcacacatccgcctaacttcggtgagggtaacgtatcaaccagatac gacacatcagacagttactatgactatggaagtacagggacgtatatgggtccacgagga tatcctgggcccccaggtccacaaggaccaagagggcctaaaggcgaaccgggtaagccc ggtggagagggtcaacaaggatttcctggagctccaggacacgttttcgtagttccgtta caacaaccgggcaatgaaaagggccctgatgcacaatctgaagctcttcgtcaaattctt acacaacacatggctgcaatgagaggagcagaaggtcctatgggtcttaccggaccacct ggcccagagggagatatcgggccagaaggaacaaagggagagccaggagatcaaggagaa ccaggaccaccaggcccaagaggcttacaaggaccaccggggcgattgggtcggagaggc cacgcaggcagagacggagaacgaggttctcctggacctcctgggcagaaaggggaacag ggttatcctggacaagcgggtatgcctggtgacaaaggagaaagaggcacaccggggcaa caaggggaagctggtgctcctggactagatggtcctccgggtgatgatggaccacctggt ccaccaggattatctggtgaactgggcccgagaggctttataggccctcgtggatttccg ggattaatcggatatccaggtataccgggaaatgagggaccacagggaactaaaggagcc gcaggacaacctggctcacccggttcaccaggccaaccaggcccgatggggcctgccggc tcaccggggcctcagggttctattggtgctccaggcattcaaggtccacaaggcaaacca ggaatatcagggcttccaggccccgaaggatcaccagggacaccgggtacacctggacaa caaggttcgcctggtgaagtaggctcaccaggcccacagggaatgttaggctttccagga cctcgaggactaaaaggtgaagatggaccaaggggcttgtccggtgataagggagacaaa ggaatcagaggacttgaaggagaaaagggtgaaatgggccctaagggagaacgtgggtta gttggagagtctgggccaccaggcattgaagggcccgaaggacaaaaaggtacagagggg cctagaggagaaacaggatctattggtccttccggcgaaaaaggtgccactggacctcaa ggcccctctggctatcctgggactcaaggagaaaagggagacaaaggagcggctgggaga cgtggacgacggggaacaaaaggaataatgggattgattggaataccaggagatcgtggt gaaggcggaccaaggggttatcgagggccacgtggccgtagaggttcggatgggccgcca gggcctaaaggcgatacaggccaacctggtccccccggttctgttggtgagcgaggccca caaggactagagggtccacgtggatttccaggcaatatgggaccacctggtacagatgga aaacccggattacctggtacgccaggagaaagaggacctacgggagagactggatcatcc ggactacctggtcctcctggactaactgggccacaaggacaaaacggtgatccaggacca cccggacttcaaggtccttctggtataccagggacaccaggagaaatgggagcacccgga gaaatgggtaaagacggacctccaggaccatctggtcccgagggcaaacctggacctgtt ggtcctccgggatcacctggacctaacggtgaaccaggactaccaggagtgcctggaaca cctggatctaaaggagatctcggtccaccgggtccgccgggtgtaagaggtgataaaggt gaacaaggagaagctgggcgagaaggattacaaggtcctatgggccgtgaaggaccccga ggagctccagggccaggaggacaaaagggagaaattggtgaacctggtcctatgggtact gtcggtcgcgacggtctacctggaccaagagggttaacgggcacaccagggcccgtaggg cccccaggagaggatggtgacaaaggagatgcaggacctccaggagaaaagggcttcaag ggtgcaatgggagaaccaggtcccattggctcgccaggaatacaaggtttaagaggggag cctggccctgtagggctaccaggagataagggtccccagggtgatcccggaccacctgga acacctgggactgatggtgctcgaggaccacctgggccagctggaaaaactggaccagaa ggttctaaaggcgatcaaggagtaaaaggagatagaggagataatggacctataggtcca cctgggcctgctggtcttactgggcctcctgggcgtcgaggagcaaagggaaatcagggg gaacaaggccttagaggacctgaaggagaacagggagaagtaggaagtccaggtgctact ggaccacaggggcctcaaggaccagagggaaaaattgggcccagaggacctgtcggacca aagggggaagatggtccaccaggactccaaggagaaacaggttcaaagggacttcctggg ccagagggatctaaaggagacccaggcccatctggttttcccggagatcgtggtgaacca gggccacaaggaataaagggtgaaccaggttcagacgggccagagggaagtacaggccca cctggcccacctggacccacgggaccaataggaaaacctggagaaactggagtgcccggt agccccggcacagaaggaccagcaggcgctcaagggagccctggtttaccaggtgaaaag ggagacactggtcctaagggttctcctggtgatataggccctgctggtgcaattggattg actggaccggaaggtcaacgaggtttaagaggacttccgggcccaccaggagatgtagga ccacctggccttatgggtccatctggcgcaccaggtacttctggaccaccaggcttacaa ggaataaagggcgataaaggaaacagagggccaaaaggccatattggagagactgggcca atgggtataaaaggagaccagggagaaataggaaagcagggaccacagggtcttactggc cctgcgggaacaaaaggcgacatgggtcctatcggacctgcgggtgctaaaggtgatatt ggtccaattggaccagttggaccagaaggccccctcggtcctaaaggttcaccgggacct gagggtcggccaggtctacccggaccgccaggagcccctggtcctccaggtcctccagcg atagcgccacaattacccgcggggctatttatgtcgagtagaaagcggcgaagtatagat gaggaatctacggagacagctacagaagacattttcgatgacgtcgaagaagttgaatgg gcgcatgaaatcatgtcaggagttatcgctgcacgaacagctgtggaaacggcaaaaaaa ccctggggtacgagatccaatcctgcgctatcttgcaaggacctacggacttcacatgtc aatttaactgacggtttctactgggttgatgcacgagggggcagtggtcgtcccattcgt gtgtactgcaaggaacacaacacctgtctgttccctgaccatatgagtccttcgttatat tctgatgcaaccgcacataaattctcacaaatagaaaatggatttaggatcacatatgat ggtgaaggttctgggtcaatacaacttcgttttcttcgactgctttcgaatggtgccaga caaaacttcacctacaactgtgtgaacacccaagctccacaaaggtcagacataccagta gatttgacgagagtaaatgaacttaaactatttggacaaaacaacgttgaattcaaagaa ccaaagattataaaggacgattgcaaggatggaacaggtgaaatagttcttgaagtaaag acatctcgcagcgatagattgccgattagtgatttccagccgctgtcgtttgtggacgcc gaacacgagttctcgtttacagctggaccaatatgtttcaactag

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