Vanessa cardui (painted lady): 124538160
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Entry
124538160 CDS
T09161
Name
(RefSeq) rab GTPase-activating protein 1-like isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcd04131
]
124538160
Membrane trafficking [BR:
vcd04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
124538160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PID_2
Mst1_SARAH
Motif
Other DBs
NCBI-GeneID:
124538160
NCBI-ProteinID:
XP_046971078
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All DBs
Position
2:complement(3380192..3413805)
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AA seq
1140 aa
AA seq
DB search
MEFNECRINEVSDLVGIEIYSDRSQTPSPTPVLTTNVCCDLEDILSDAISESLQSSLRVS
RSQLINQELTIRPEANIESNIPEGLDLYKVIFEVESDSDFKMSELEGTSQTNTVKNPESC
RHVGGSKFYEVVDGSSAVTSTPSPTEKQDHMKPIESDDEVSDVDQECTVFCGVSYLGAQN
IADPKSETDIQRIMKELSSMPENRDGIAVSISIPVCSQGLVVLYQADTNSVMTRYAVNRI
SFYARGAAGSPVASCFAFTWSHGETKESAVYRCHVFRCHIAEAVSQVSSCFAKAFERIPR
SMASSLVGDLSAAPSMTGSLTEGLGPAAPPMQLMHVLECTVDIKETDAKGTFSHVPKERL
GYKLRGGIDKQVTINVTQVTNNVQAEPDDPQSSYTGGLYIERCFGILLAPGRSVKHSDMQ
LLEMVSGSSGGSGCSVCALWNAGESALAAFNLASGDGAPAYMSLALDLVIRGIRDPLRLV
IETPVKVYPPAERFWYYSKRPLVQQFYINLRESVDSLGQLQYEVSSVETSGELDRSRLNL
PLSLSSLLPSPLSAAPAPPSPSEPDSDGDEPLLSGTGEVSKDCGVDVLENWAQVLRNWIG
PRPRALSQLVRVGVPEALRGEVWLRLAGVDQNDKLMETYRTLISKDCPFEAVIQRDIART
FPAHDFFREAGGLGQDSLLRMARAYAVYDVEVGYCQGLSFLAATLLLHMPEEQAFCLLVR
LMYGYGLRELYKDGFEALYMRLHQLDRLMEEQLNDLRAHFQELGVEPHMFASQWFLTVFT
ARFPLPLVYHILDVFLLQGMDTLFQVSLALLSRARKDLLQHDFEGVLKYFRVTLPKKCRA
EEASRQIVKLACSIKVKRLQKYQLEYEKFIKESAEKEKINVELERLKVINTQLQQEKDMF
ESQLKQTRSNLEESQRESVHYAAVARDYREICARLDKQLHQMQDCVNSCVSCSVKLAQKD
NKEELEPKGEEKESSSDTEARLKQRVRDLELELAQVKLAHVQAQCSNQELSHQLNAALSE
MQAAMTQKQSVTPWLVRTLGSIMEAAQNRPSFQTYLPNLNQEQQSPSLHRQGSFSNTQAQ
SHANLDRRVSEPYSPDVVRRKKDLNAKRHSMLVESNLSKEAKDLNRRSHDVTIVKNLSMG
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggagttcaatgaatgtcgtataaatgaggtatcggatctggtaggcattgaaatatat
tctgatcgatctcagacgccaagcccgactcctgttctaacaacaaatgtatgctgcgat
ctagaagacatattgagcgacgcaatatcggagtctcttcaaagctccctcagagtgagc
cgcagtcagctgataaatcaagagttgacaatccgtccagaggctaatattgaatcaaac
attccagaaggtctagatctatacaaggttatatttgaagtggaaagtgattcagatttc
aaaatgagtgaattagaggggacgagtcagacaaacacagttaagaatccggagtcgtgc
cggcacgtcggcggctcgaagttctacgaagttgtagacgggtcgtcggcggtcacatcc
acaccgtctccgacagagaaacaggatcacatgaaacctattgagagtgatgatgaagta
tcagatgtcgaccaagagtgcacagtgttctgcggagtcagttacctcggcgctcagaac
atagccgatccaaaatcggagaccgacatacagcgtatcatgaaggagctgagttcgatg
cccgagaaccgggacggtatcgccgtctcgatttcaataccagtctgctcccagggacta
gtcgttttgtaccaagcggacacgaacagcgtgatgacgaggtacgcggtgaacaggata
tcgttctacgcgcgcggcgcggcgggctcgcccgtggcgtcgtgcttcgcgttcacgtgg
tcgcacggcgagaccaaggagtcggccgtgtaccgctgccacgtgttccgctgccacatc
gccgaggccgtcagccaggtgtcgagttgctttgccaaggcgtttgagcgtataccgcgt
tcgatggcgtcgtctctggtgggagacttgagtgcagcgccatctatgacgggctccctg
accgagggtctcgggcccgcggcgccgcccatgcagctgatgcacgttctcgagtgcact
gtggacatcaaggagactgatgctaagggtacattcagtcatgtgccgaaagaacgtctc
ggctacaagttgcgcggcggcatcgacaaacaagtgaccattaatgtgacgcaggtcact
aataacgtgcaagcagaaccggatgatccgcagtcatcatacacgggaggtttgtacata
gagaggtgttttggcatccttctcgcacccgggcggagtgttaaacattcggacatgcag
ttgcttgaaatggtgagcggctcgtcgggcggctcgggctgctcggtgtgcgcgctgtgg
aacgcgggcgagtcggcgctggccgccttcaacttggccagcggcgacggcgcgcccgca
tacatgtcgctcgcgctcgacctcgtcatccgcggcatccgcgacccgctgcggttagta
atcgaaacaccagtcaaagtgtatccaccagcggagcgattttggtactactccaaacga
ccactcgtacaacagttctatattaacctgagagagtcggtagactctctggggcagctg
cagtacgaagtgtcgagcgtggagacgtcgggggagctggaccggtcccggctcaacctg
ccgctgtcgctgtccagtctgctgccgtcgccgctctccgccgcgcctgcgccgccctca
ccctcggagcccgactccgatggcgatgaaccgcttttaagtggaaccggcgaagtgtct
aaagattgtggcgtagacgtacttgagaattgggcacaagtactcagaaattggatcgga
ccccgtccccgcgctctcagtcagctcgtacgtgtgggagtgccagaagcgcttcgaggc
gaggtctggctgagactggccggcgtcgaccagaacgataagctcatggagacataccgt
acgctcatcagcaaggactgcccgttcgaggcggtgatccagcgcgacatcgcgcgcacg
ttcccggcacacgacttcttccgcgaggccggcgggctgggtcaggactcgctgcttcgc
atggcgcgcgcctacgccgtgtacgacgtggaggtgggctactgccaggggctcagcttc
ctcgccgccacgctgctgctgcacatgccagaagagcaagcgttttgtctactggttcgt
ttgatgtatggatacggattacgagagctgtataaggatggtttcgaagcactctatatg
aggttgcaccagttggatagattgatggaggaacaactaaacgacttacgcgcacacttc
caagaattgggcgtcgaaccacacatgttcgcgtcgcagtggttccttacagtattcact
gctcggtttccactaccattggtctatcacatcctggacgtatttctgctacaaggaatg
gacaccctcttccaagtttcgctggctctgctcagtcgtgctcgaaaggatctcttgcaa
cacgattttgaaggcgtactcaaatatttcagagtaacgttaccgaagaaatgtcgcgcc
gaggaagcttcgcggcagatagtgaaactggcttgcagtattaaagtcaaaaggctacag
aagtatcaattggaatacgaaaagttcatcaaagaatcggcggaaaaagaaaagatcaat
gtggaattggaacgattaaaagttataaatacacaactccaacaagaaaaggatatgttc
gaaagtcaacttaaacagactcggagtaacttggaggagtcgcagcgtgagtcggtgcac
tacgcggccgtggcgcgcgactaccgggagatatgcgcgcgcctcgacaagcagctacac
caaatgcaggactgtgtgaacagctgcgtcagttgcagcgtgaagttagcacagaaagac
aacaaagaggagctggagccgaagggcgaggagaaggagagctcgagcgacacggaggcg
cgactaaagcagcgcgtgcgcgacctcgagctcgaactcgcgcaggtcaagctggcgcac
gtgcaggcgcagtgcagcaaccaggagctgagccatcagttaaacgcggcgctgagcgag
atgcaggcggccatgacccagaagcagtcggtgacgccgtggctcgtgcgcacgctgggt
tccatcatggaagcagcgcaaaaccgaccatcgttccaaacgtaccttccaaatttaaat
caagaacaacaatcgccgtcgctccatagacagggttcgttttctaacacgcaggcacag
agtcacgctaatctcgacaggcgtgtgtccgaaccgtacagtccggacgtcgtcagaagg
aagaaggatcttaacgcgaaaagacactcgatgctcgtcgaatcgaatctcagcaaggag
gcgaaagatctgaatcgaaggagtcacgacgtcactatcgtaaagaacctgtcgatgggt
tga
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