KEGG   Vanessa cardui (painted lady): 124538221
Entry
124538221         CDS       T09161                                 
Symbol
LOC124538221
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
vcd  Vanessa cardui (painted lady)
Pathway
vcd03030  DNA replication
vcd03410  Base excision repair
vcd03420  Nucleotide excision repair
vcd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vcd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124538221 (LOC124538221)
   03410 Base excision repair
    124538221 (LOC124538221)
   03420 Nucleotide excision repair
    124538221 (LOC124538221)
   03430 Mismatch repair
    124538221 (LOC124538221)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcd03032]
    124538221 (LOC124538221)
   03036 Chromosome and associated proteins [BR:vcd03036]
    124538221 (LOC124538221)
   03400 DNA repair and recombination proteins [BR:vcd03400]
    124538221 (LOC124538221)
DNA replication proteins [BR:vcd03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    124538221 (LOC124538221)
  DNA Replication Termination Factors
   ELG1-RFC complex
    124538221 (LOC124538221)
Chromosome and associated proteins [BR:vcd03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    124538221 (LOC124538221)
DNA repair and recombination proteins [BR:vcd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     124538221 (LOC124538221)
  Check point factors
   HRAD17(Rad24)-RFC complex
    124538221 (LOC124538221)
SSDB
Motif
Pfam: AAA DNA_pol3_delta2 RCF1-5-like_lid Rep_fac_C Mg_chelatase AAA_22 AAA_16 AAA_30 RuvB_N AAA_11 Rad17 AAA_24 bpMoxR Gp44_lid SLFN-g3_helicase DUF815 AAA_3 AAA_19 nSTAND_NTPase5 AAA_5 HalOD1 Viral_helicase1 AAA_assoc_2 AAA_7
Other DBs
NCBI-GeneID: 124538221
NCBI-ProteinID: XP_046971163
LinkDB
Position
2:10565705..10570224
AA seq 350 aa
MQAFLKTGKISSADKPSSSGVKSVKKKPPAPWVEKYRPKTIDDIVDQAEVVQVLRECLAG
GDLPHLLFYGPPGTGKTSAILAAARQLFGDITRDRVLELNASDERGIQVIRDKVKSFSQL
TVSSSRPDGRPCPPYKLVILDEADSMTTAAQAALRRTMEKETRTTRFCLICNYVSRIIPP
ITSRCSKFRFKPLARENVIKRLRDVCEAEGVDVGDGEILHEAVDTCEGDLRRALTALQCC
QRLIGKITSDGLIEVTGLVPQKLTDEFLGIKNYSELEIFVENFLMEAYSASQLLEQLSAT
VVKAGHLTNKQKCVISEKVAVCSYRLLDGGAEVMQLTDLGCTIIMANNDP
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgcaagcttttttgaaaactggtaaaatttcaagtgccgataaaccttcttcatctgga
gtaaaatcagtgaaaaagaaacctcccgcgccatgggttgaaaaataccgaccgaaaaca
atagacgacatcgttgatcaagcagaggttgtacaagtgcttcgtgagtgcttggccggt
ggcgacctaccgcacttgttgttctatggtccgccaggaactggtaaaacgagtgcaatt
ctcgcagctgcacgtcagctcttcggcgatattactcgtgatcgcgtccttgaacttaac
gcatccgacgagcgtggtatccaagtgataagagataaagttaaatcattttcacaactt
actgtcagcagtagcaggcctgacggcaggccatgccctccttacaaactggtgatactc
gacgaagcggactctatgacaacagcggcgcaggcagcgttgcgtcgtactatggaaaaa
gagacccgaacaactcggttttgtctcatttgcaactacgtatccagaatcataccacct
attacaagcagatgttctaaatttagatttaaaccacttgcaagagaaaatgttataaaa
agactacgagatgtttgtgaagcggaaggtgtagatgttggcgacggtgagatcttacat
gaggcagtcgacacatgtgagggtgacctgcgtcgtgcactcacagctttacagtgctgc
cagcgcttaattggaaagattacctctgatggattaattgaggtaacagggcttgtacct
caaaaactgactgatgagttcctaggcatcaaaaattacagtgaactagaaatatttgtt
gagaatttcctcatggaagcatattcagcatcacagctcttggaacagctgagcgctacc
gtggtgaaggcaggtcacctgaccaacaaacagaaatgcgttataagtgagaaagtggcg
gtgtgctcgtatcggctgctggacggcggcgcggaagtcatgcaattaactgatttaggt
tgcacgataattatggctaataatgatccttaa

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