Vanessa cardui (painted lady): 124538221
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Entry
124538221 CDS
T09161
Symbol
LOC124538221
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03030
DNA replication
vcd03410
Base excision repair
vcd03420
Nucleotide excision repair
vcd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124538221 (LOC124538221)
03410 Base excision repair
124538221 (LOC124538221)
03420 Nucleotide excision repair
124538221 (LOC124538221)
03430 Mismatch repair
124538221 (LOC124538221)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcd03032
]
124538221 (LOC124538221)
03036 Chromosome and associated proteins [BR:
vcd03036
]
124538221 (LOC124538221)
03400 DNA repair and recombination proteins [BR:
vcd03400
]
124538221 (LOC124538221)
DNA replication proteins [BR:
vcd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124538221 (LOC124538221)
DNA Replication Termination Factors
ELG1-RFC complex
124538221 (LOC124538221)
Chromosome and associated proteins [BR:
vcd03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124538221 (LOC124538221)
DNA repair and recombination proteins [BR:
vcd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124538221 (LOC124538221)
Check point factors
HRAD17(Rad24)-RFC complex
124538221 (LOC124538221)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rep_fac_C
Mg_chelatase
AAA_22
AAA_16
AAA_30
RuvB_N
AAA_11
Rad17
AAA_24
bpMoxR
Gp44_lid
SLFN-g3_helicase
DUF815
AAA_3
AAA_19
nSTAND_NTPase5
AAA_5
HalOD1
Viral_helicase1
AAA_assoc_2
AAA_7
Motif
Other DBs
NCBI-GeneID:
124538221
NCBI-ProteinID:
XP_046971163
LinkDB
All DBs
Position
2:10565705..10570224
Genome browser
AA seq
350 aa
AA seq
DB search
MQAFLKTGKISSADKPSSSGVKSVKKKPPAPWVEKYRPKTIDDIVDQAEVVQVLRECLAG
GDLPHLLFYGPPGTGKTSAILAAARQLFGDITRDRVLELNASDERGIQVIRDKVKSFSQL
TVSSSRPDGRPCPPYKLVILDEADSMTTAAQAALRRTMEKETRTTRFCLICNYVSRIIPP
ITSRCSKFRFKPLARENVIKRLRDVCEAEGVDVGDGEILHEAVDTCEGDLRRALTALQCC
QRLIGKITSDGLIEVTGLVPQKLTDEFLGIKNYSELEIFVENFLMEAYSASQLLEQLSAT
VVKAGHLTNKQKCVISEKVAVCSYRLLDGGAEVMQLTDLGCTIIMANNDP
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcttttttgaaaactggtaaaatttcaagtgccgataaaccttcttcatctgga
gtaaaatcagtgaaaaagaaacctcccgcgccatgggttgaaaaataccgaccgaaaaca
atagacgacatcgttgatcaagcagaggttgtacaagtgcttcgtgagtgcttggccggt
ggcgacctaccgcacttgttgttctatggtccgccaggaactggtaaaacgagtgcaatt
ctcgcagctgcacgtcagctcttcggcgatattactcgtgatcgcgtccttgaacttaac
gcatccgacgagcgtggtatccaagtgataagagataaagttaaatcattttcacaactt
actgtcagcagtagcaggcctgacggcaggccatgccctccttacaaactggtgatactc
gacgaagcggactctatgacaacagcggcgcaggcagcgttgcgtcgtactatggaaaaa
gagacccgaacaactcggttttgtctcatttgcaactacgtatccagaatcataccacct
attacaagcagatgttctaaatttagatttaaaccacttgcaagagaaaatgttataaaa
agactacgagatgtttgtgaagcggaaggtgtagatgttggcgacggtgagatcttacat
gaggcagtcgacacatgtgagggtgacctgcgtcgtgcactcacagctttacagtgctgc
cagcgcttaattggaaagattacctctgatggattaattgaggtaacagggcttgtacct
caaaaactgactgatgagttcctaggcatcaaaaattacagtgaactagaaatatttgtt
gagaatttcctcatggaagcatattcagcatcacagctcttggaacagctgagcgctacc
gtggtgaaggcaggtcacctgaccaacaaacagaaatgcgttataagtgagaaagtggcg
gtgtgctcgtatcggctgctggacggcggcgcggaagtcatgcaattaactgatttaggt
tgcacgataattatggctaataatgatccttaa
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