Vanessa cardui (painted lady): 124538334
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Entry
124538334 CDS
T09161
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03013
Nucleocytoplasmic transport
vcd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124538334
03015 mRNA surveillance pathway
124538334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcd03019
]
124538334
03041 Spliceosome [BR:
vcd03041
]
124538334
Messenger RNA biogenesis [BR:
vcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124538334
Spliceosome [BR:
vcd03041
]
Complex C
Other components
EJC/TREX
124538334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
RSB_motif
FlaC_arch
Pinin_SDK_N
Motif
Other DBs
NCBI-GeneID:
124538334
NCBI-ProteinID:
XP_046971322
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Position
20:complement(239708..242717)
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AA seq
400 aa
AA seq
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MGTEIDISFSTLRAQLESEKSSLYKIDENIKKIVQTSGRFSDRFNAPADYTRGGSRLGGR
NAYPDVANNYKNEDQSKRKHETKTVFSRLSARFNDSDGEDDGPGPKRNKVPSTVCRELPT
RAAVLRAQGDDEQARKRNRRIFGSLLGTLQKFKQEEIVMQTKEDKRALVEKKIEEQARLE
KERELKERKTLFAERDHKKATIKALEAKMARVHEFEKWEASQQCLSNFILTKTKPHIYWL
PKKISEKATEKLNSSRKFHESYMARKREELQDELQRIEHRCLRPRGPGAKENDLENHHRN
YVFDKSPIIEDIKQEDRGRKRDKFAMDVDEKDQDESDGEDRQNEVQENETEKIESDENKM
DTSTEQQPVSETEEATNKEDINEPITTNECEEVKDVTSDP
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggggaccgagatagatatatcgtttagtaccttacgtgctcaattagagagtgaaaaa
agtagtttgtataagattgacgaaaacattaagaaaattgttcaaacctcaggacggttt
tcagatagatttaacgctcccgccgattacacaagaggcggatcgcgcttaggtggaaga
aatgcttaccctgacgtagctaacaattacaaaaatgaagatcaatcaaagcgcaaacat
gaaacgaagactgtctttagcagattatctgcaagattcaatgatagtgatggagaagat
gatggcccaggaccaaagaggaacaaagtaccctcaacagtgtgccgggagcttccgacc
agagctgcagtgttgcgagctcaaggagatgatgaacaagcaaggaaacgtaatagaaga
atatttggatcattgcttggaacacttcagaagtttaagcaagaggagattgtaatgcag
actaaagaagacaaaagggccctagttgaaaaaaaaattgaggaacaggcaagattagaa
aaggaaagagaattgaaagagcgaaagacattatttgcagagcgggatcataaaaaagca
accataaaagctttagaagcaaagatggcacgagtacatgagtttgagaagtgggaagca
tcacagcaatgcttaagtaacttcattctgactaaaaccaaaccacatatatactggctg
ccaaagaagatatcagaaaaagcaactgaaaaattaaattccagtagaaaattccatgag
agttatatggcaaggaaacgagaagaattgcaagatgagttacaacggatagagcatagg
tgtctacgaccaagaggccccggtgctaaggagaatgatctggaaaaccatcacagaaat
tatgtttttgataaatcccctattattgaggatatcaaacaagaggatagaggaaggaag
agagataagtttgctatggatgtggatgaaaaggatcaagatgaaagtgatggtgaagac
agacaaaatgaggttcaggaaaatgaaacggaaaaaatagaatcagatgaaaacaaaatg
gacaccagcacagagcagcaacctgtatctgaaaccgaggaagcaaccaacaaagaagat
ataaatgaacccatcactaccaacgaatgtgaagaagtgaaagatgtcacatctgatcca
taa
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