Vanessa cardui (painted lady): 124538347
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Entry
124538347 CDS
T09161
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd04120
Ubiquitin mediated proteolysis
vcd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124538347
04120 Ubiquitin mediated proteolysis
124538347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vcd04121
]
124538347
Enzymes [BR:
vcd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124538347
Ubiquitin system [BR:
vcd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124538347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_11
zf-RING_16
zf-RING_5
zf-ANAPC11
zf-RING-like
Endonuclease_7
zf-Nse
Motif
Other DBs
NCBI-GeneID:
124538347
NCBI-ProteinID:
XP_046971342
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Position
20:5099515..5109414
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AA seq
542 aa
AA seq
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MKMKAVVATVISLALTTVVIGNAYYQKKQFYPSVVYLTNSNPSMAVMYLQAFILVLLVGK
ILRKIFFGQLRPAEFEHLIERSWFAITETCLAFTVFRDDFNPKFIALFTLLLFLKAFHWL
AEDRVDYMERSPVIGWLFHIRILSLLMLLAQADLYFIHHAYAFTATKGPSVQLVFGFEYS
ILIIMIVNILIKYLLHAIDSRWEAPWESKAAVLLYTELAINFLKVLLYVGFVAVMVRIYT
LPLFAFRPMYETMRSFKKAYNDVVLSRRAIRNMNTLYPDATAAELAAADNECIICREEMH
SGAKKLPCNHIFHAACLRLWFQRQQTCPTCRLNVLRAPAPEPANANAPPPPNAPHAHANA
NANANANVPPPPSAAPVPPPFPNMPPPPMMGWGLPPPPPRPAALASLSADELRRLEGTER
RNVEARLQLLREIQAMLDASVLLMQQYSNVVANLPLNCNTVATQTDLNRTEPSPEASVKV
KTEPDVVPTTSTYKPTPGPSTSRDDFTMDDADTTSPESFRDSIDADAEELRRRRLQKFTA
EK
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaaggctgtagtagcgactgtaatcagtctagcactaacgactgtggtaata
ggcaatgcctattaccagaagaaacagttttatccatcagtggtttacctcactaactcg
aatcctagcatggctgtcatgtacttgcaggcctttatactggtattattggtaggtaaa
atattaagaaagatcttctttggtcaactacgcccagctgaatttgagcacctgattgag
agatcctggtttgcaataacagagacatgcctggcgtttacggtgtttcgtgatgatttc
aatcctaaattcatagctctatttacacttttgctattcttgaaggcattccattggctt
gctgaagatagagttgattatatggaaaggagtcccgtgattggatggttattccatatt
agaatcctgagcctgttgatgctcttggcacaagctgatttgtatttcatccaccatgca
tacgcattcacggctacgaaaggaccttcagtacaattggtctttggatttgaatacagc
atattaataataatgattgtgaatatattgataaagtatctactgcacgcgatcgactcc
cgctgggaggcgccatgggagagcaaggcggcagtgctgctctacacggagctggccatc
aacttcctcaaagtgctgctttacgtcggcttcgtggctgtcatggtccgaatctacacg
ctgcccctgttcgctttccgaccgatgtatgaaactatgaggagtttcaagaaggcctac
aatgacgtggtcctgtctcggcgcgcgatccgcaacatgaacaccctgtacccggacgcc
acggcggcggagctggcggccgccgacaacgagtgtattatctgtcgcgaggagatgcac
agcggcgcgaagaagctgccgtgcaatcacatattccacgcggcgtgcctccggctgtgg
ttccagcggcagcagacgtgccccacgtgccgcctcaacgtgctgcgggcgcccgcgccc
gagcccgccaacgccaacgcgccgccgccgcccaacgcgccgcacgcccacgccaacgct
aacgccaacgccaacgccaacgtgccgccgccgcccagcgccgcgcccgtgccgccgccc
ttccccaacatgccgcccccaccgatgatggggtgggggctgccgccgccgccgccgcgg
cccgccgcgctggccagcctcagcgccgacgagctgcggcgcctcgagggcaccgagcga
cgcaacgtggaggcccgcctgcagctactccgtgaaattcaagcgatgctagacgcgtcg
gtgctcctcatgcaacaatactccaacgtcgtcgctaatttgcccttaaattgtaatacc
gtcgcaacacaaactgatttaaatcggacggagccgtctccggaggcttctgttaaagtg
aagactgaaccagatgtggtgcccaccacttcaacatacaagccgaccccgggaccttca
acgagcagggacgacttcacaatggacgatgctgacacgacgagtcctgaatcttttaga
gatagcatcgatgcggatgcggaagagcttagaagacgtcgattacagaaattcactgca
gagaaatga
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