Vanessa cardui (painted lady): 124538431
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Entry
124538431 CDS
T09161
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124538431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcd03021
]
124538431
03036 Chromosome and associated proteins [BR:
vcd03036
]
124538431
Transcription machinery [BR:
vcd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124538431
Coactivators
SAGA/TFTC/STAGA complex
124538431
Chromosome and associated proteins [BR:
vcd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
124538431
STAGA complex
124538431
TFTC complex
124538431
SAGA complex
124538431
SLIK complex
124538431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Tetrabrachion
Motif
Other DBs
NCBI-GeneID:
124538431
NCBI-ProteinID:
XP_046971454
LinkDB
All DBs
Position
2:complement(9467495..9473051)
Genome browser
AA seq
647 aa
AA seq
DB search
MSDADLAYSSSFTVDSMKVIAESVGIGSLGDDAAKELADDVTYRLKVIVQDAMKFMHHSK
RQKLSITDIDHALKVKNIEAQYGFIQPDSLPFRFASGGGRELHFIEEKEIDLSEILSAPP
PKIPLDVSLRAHWLSVDGVQPTVPENPPPLSKESQKLESVDPITKLSKPATKDAVGKPVC
GKAARLKASESVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRAEALQSLACDPGLHE
MLPRMCTFISEGVKVNVVQNNLALLIYLMRMVKAILDNQSLYLEKYLHEMIPSVSTCIVS
RQLCVRPEVDNHWALRDFAARLMAQICKTFNTSTNNLQTRVTRLFAKALQCPSQTNNESG
PSMVASMKESEKTPLASLYGAVQGLAELGPEVVKVFILPRVRWLGERVEGALSGIGGADR
LAAGNLKHQLLKVLAPVVRQLRQPPDLPDDYKREYGYLGPSLQQMVSKQRTSPAGGGGGG
AVAVVACTPPLLPAPAPAPAPPAHAKAVESVASRNVVITASPTPQSPAPSTPPPQKFVIV
ASQQKPQQTQPASGAGHIVVHTSQPTIVRSQNVQSMVVTSGPAGAQQPQKMVVVGVHPSH
QGLQASSSVTGVSQAPVSVLAKSVFARSGSGPQPQPPPELDDLSHLA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgcagatttagcctacagttcttctttcactgtagattctatgaaagttatt
gctgagagtgtaggtattggtagccttggagatgatgctgctaaggaactagccgacgac
gtaacatatcgtcttaaagttattgtccaagatgctatgaaatttatgcatcattctaag
cggcaaaagctttccattacagacattgaccatgctttaaaagttaaaaatatagaggct
caatatgggtttattcaacctgactcattgccatttaggtttgcgtcgggtggcggccga
gagttgcattttattgaggaaaaggaaattgatttatcagagatactgtctgcacctcca
cctaaaattccccttgatgtttctctaagagctcattggttgagtgttgatggagttcag
cctacggtgccagaaaatcctcctccattatcaaaagagtctcaaaaacttgaatctgtg
gatcctattactaaattaagtaaacctgctactaaggatgcagtcggtaaaccagtttgc
ggtaaagcagctcgattaaaagcctctgagtctgttcatgtcaaacaattggctactcat
gagctaagtgttgagcaacagttgtactataaagagatcactgaagcctgtgtcggaagt
gatgaaggacgccgtgcggaagctcttcaatcactggcatgtgatcctggacttcatgag
atgttaccaagaatgtgcacatttatatctgagggtgtgaaagtgaatgttgtccaaaac
aatttagcacttcttatctatttaatgaggatggtgaaagctattcttgataatcagtct
ttatatctggaaaaatatctccatgagatgatcccatcagtatcaacatgtatagtgtca
aggcaattgtgcgtacgaccggaggttgacaaccattgggcactacgagactttgcagct
cgtctcatggcccaaatatgcaagacatttaatacatcgactaataatctacaaacacga
gtcacaaggttatttgcgaaagctttacagtgtccgtctcagacaaacaacgaaagtgga
ccatctatggtcgcttctatgaaggagtctgagaaaacgcctctcgcgtctctgtatggg
gccgtacagggtctagcggagctcggacccgaagtagtgaaggtgttcatcctgccgcgc
gtgcgctggctgggcgagcgcgtggagggcgcgctgagcggcatcggcggcgcggaccgc
ctggcggccggcaacctcaagcaccagctgctcaaggtgctggcgcccgtcgtgcgccag
ctgcgccagccgcccgacctgcccgacgactacaaacgcgagtacgggtacctgggcccg
agcctgcagcagatggtgagcaagcagcgcacgtcgccggcgggcggcggcggcggcggc
gcggtggcggtggtggcgtgcacgccgccgctgctgcccgcgcccgcgcccgcgcccgcc
ccccccgcgcacgccaaggccgtcgaatcggtggcgtctcgtaacgtggtgataacggcg
tcgcccacgccgcagtcgccggcgccctcgacgccgccgccgcagaagttcgttatagtg
gcttcgcaacagaaacctcagcagactcagcctgcgagcggagcaggtcatatcgtcgtg
cacacctcccaacccaccatcgttcgcagtcaaaatgtacagtcgatggtggtgacaagt
ggtccagcgggcgcgcagcagccgcagaagatggtggtggtgggcgtgcacccttcgcac
cagggactgcaagcctcgtcctccgtcaccggcgtcagtcaggccccggtgtcggtgctg
gcgaagtcggtgttcgcgcgcagcgggtcgggcccgcagccgcagccgccgccggagctc
gacgacctgtcgcacctggcctga
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