Vanessa cardui (painted lady): 124538708
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Entry
124538708 CDS
T09161
Name
(RefSeq) septin-interacting protein 1
KO
K13103
tuftelin-interacting protein 11
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcd03041
]
124538708
Spliceosome [BR:
vcd03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
124538708
Other components
Complex C specific factors
124538708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
124538708
NCBI-ProteinID:
XP_046971814
LinkDB
All DBs
Position
21:516622..524772
Genome browser
AA seq
775 aa
AA seq
DB search
MSDDEVIRFEITDYDLDNEFNPNRNRRAKKEHQIYGIWAKDSDEEDNEDNIRQKSRKPKD
FSAPIGFVAGGVQQAGKKKEEKKKELLEKSEASTSRPKFADSSDEDEPANPDERETAGIR
RAGQGLRGVNLGGSVGAWEKHTKGIGAKLLLQMGYQPGRGLGKDLQGISAPVEATVRKGR
GAIGAYGPEKAAQKAKKEEERRQIEKEKEEEGSKEKTGNWKKSHKGRYFYRDAADVIQEG
KPTMHTISSDELSRVPVIDLTGREKKVLSGYHALRAAAPRYEHEPRRACTRFQAPELSHN
LQLMVDCCEQDIIRNARELQQAEDEIVALGRDLDEHDARLRDQDAVVARVQAILARVERL
SRPDASLETAHDVLSDLKESFPLEYEMFGLGSIAGNIVSPLLSAMLAKWDPLQSPEEPVA
AVARWRALLTGEAYDALLGQLLLPPLARAAEAWEPRAPARMVAALEAWRGAAPAWLARAV
AARHVAPRLLGAVRAWDPTRDTLPVHRWVLPWHALAGEALAAAVYPLIRSRLAAALAAWH
PADASARPLLAAWRDAWGPALGPLLHHHVLPKLEHCLRAAPVELVGRENAAWLWCVQWLE
LLGAPTLGALAARALLPRWLGALAAWLNTAPPHATVLASYSAFRKMFPEEILKEPVVRDA
FRKALDMMNRSTDIESLEPPPPPRFTPSESKDTSKIDILASVAQQKSFSELLESRCIEKG
ITFVPIAGKLREGRPLYKIGELQCYVIRNVIMYSNDGGRTFAPIGLDRLLSLVEE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgacgaagttatacggtttgaaattactgactatgatttggataacgaattc
aatccaaacagaaatcgaagagctaagaaagaacaccagatatatggtatatgggcaaaa
gacagtgatgaggaagacaatgaagataacatcagacagaagagtcggaagccaaaagac
ttctcggctcctattggctttgtggcaggaggtgtgcagcaggcaggcaagaaaaaagaa
gagaaaaagaaagaattattagaaaaatcagaagcatccacttctcgacccaaatttgca
gacagctcagatgaggatgaaccagcaaatccagatgaaagagagactgcaggtatccgt
cgagcggggcaaggcttacgaggtgtcaaccttggaggaagtgttggagcctgggaaaag
cataccaaaggaattggtgctaagcttttgttacagatgggttaccaacctggaagaggt
ctgggtaaagatctgcagggtatatcagcccccgtagaagctactgtgagaaaaggaagg
ggggctattggagcttacggacctgagaaggcagctcaaaaagcaaaaaaggaggaggag
cgtcgtcagatagagaaagaaaaagaggaagaaggtagcaaggagaagactggcaactgg
aaaaagtctcacaagggtcgctacttctacagggatgcggcagatgtgatacaagagggt
aaacccaccatgcatactattagcagcgacgagctgtctcgcgtgccggtgatcgacctg
acggggcgcgagaagaaggtgctgagcggctaccacgcgctgcgcgccgccgcgccgcgc
tacgagcacgagccgcgccgcgcctgcacgcgcttccaggcgcccgagctgtcgcacaac
ctgcagctcatggtggactgctgcgagcaggacatcatccgcaacgcgcgcgagctgcag
caggccgaggacgagatcgtggcgctgggccgcgacctggacgagcacgacgcccgcctg
cgcgaccaggacgccgtcgtcgcgcgcgtgcaggccatcctcgcgcgcgtcgagcgcctc
agccgccccgacgcctcgctcgagaccgcccacgacgtcctctcggacctgaaggagtcg
ttcccgctcgagtacgagatgttcgggctcgggagcatcgccggcaacatcgtgagcccg
ctgctcagcgcgatgctggccaagtgggacccgctgcagagccccgaggagccggtggcg
gcggtggcgcggtggcgcgcgctgctgacgggcgaggcgtacgacgcgctgctggggcag
ctgctgctgccgccgctggcgcgcgcggccgaggcgtgggagccgcgcgcgccggcgcgc
atggtggcggcgctggaggcgtggcgcggcgcggcgccggcgtggctggcgcgcgcggtg
gcggcgcgccacgtggcgccgcgcctgctgggcgccgtgcgcgcgtgggacccgacgcgc
gacacgctgcccgtgcaccgctgggtgctgccgtggcacgcgctggcgggcgaggcgctg
gcggcggccgtgtacccgctcatccgctcgcggctggcggcggcgctggcggcgtggcac
ccggccgacgcgtcggcgcgcccgctgctggcggcgtggcgcgacgcgtgggggccggcg
ctggggccgctgctgcaccaccacgtgctgcccaagctggagcactgcctgcgcgccgcg
cccgtcgagctcgtcggccgcgagaacgcggcgtggctgtggtgcgtgcagtggctggag
ctgctgggcgcgccgacgctgggcgcgctggcggcgcgggcgctgctgccgcgctggctg
ggcgcgctggcggcgtggctcaacaccgcgccgccgcacgccaccgtgctcgcctcctac
tctgccttccgcaaaatgtttccggaagaaatcctcaaggagcccgttgtacgtgacgcg
ttcagaaaagccctggatatgatgaaccgaagcactgatatcgagtccctcgagcctccc
cctccacctcgcttcaccccctctgagtctaaggacacctccaaaattgacatattggca
tcagttgctcaacagaagagcttctccgaactcctagaatctagatgtattgaaaagggg
ataacgttcgttcccatcgcggggaaactgagggaggggaggcccctgtacaagatcggg
gagttgcagtgttacgttatacgtaacgtgataatgtattccaatgatggtggcaggacg
ttcgcccccataggtctggacaggttgttgagtttagtggaagagtga
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