Vanessa cardui (painted lady): 124538734
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Entry
124538734 CDS
T09161
Name
(RefSeq) uncharacterized protein LOC124538734
KO
K26457
neuronal PAS domain-containing protein 4
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcd03000
]
124538734
Transcription factors [BR:
vcd03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
124538734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
bHLH_NPAS4
PAS_3
PAS
HLH
PAS_2
PAS_9
Motif
Other DBs
NCBI-GeneID:
124538734
NCBI-ProteinID:
XP_046971861
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All DBs
Position
21:complement(7821236..7959509)
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AA seq
649 aa
AA seq
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MFTRFDQGKSTKGASKLRRDLINAEIANLRDLLPLPPSTRQRLSQLQLMALVCVYVRKSN
YFQQVFKRFDINQQSSNAPNFGFSKALNGFLMMMTQNGKLLYISDNAAEYLGHSMEDLLI
HGDSVYDVIDKQDQQAVRSELSRAPTDGEDRVFLCRMNVARNARRQMRFGDQKVVLVRGH
YVSYLPLCSRNEPVFLAACTPLAMPETRECVVHGATNVFTTVHAMDMKILHIDSNSEWHL
GWERSSLHGVSWYHLLHPDCIKEAQNKHRLITQSEQERSCIALLRLQRRCGQFLWVHAVL
QLKDNLENSQRPVIVCTNQVLSEQEAAVMKANPWLYHYYAVQSKLHYGLAYEAATRMYGP
PPPDIQVYPTTMQYAPTPPVCINGNQAVMMPNSSLQPHIPHVPPHLTPIHYAYERHDNGP
VDYSVSLHENRYHNLRIDESRSHPSAKRKAKQSDDKTPVANLSPRFSASNIGGETLVAIA
ATSITNRRPGSKNFSLTETEMIDQWNPSPTWSESALQKVPDVCHQDLSPYVTTTPPTPSG
TPSAYTQNYSHTFVFDWSPEQYVPHTNNRCSTVTTESSYQQTWNRNQRMTFASSNDNSID
ENCNPNRINLPMRVSRTPPEHNSLREGETLRRQMDRPHPDSPGAKKPAL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgttcacaaggttcgatcaaggcaaatcaacgaaaggcgcgagcaaacttcggcgcgac
ctcatcaacgcagagattgccaaccttcgggacctcctacccctccccccttccactcga
cagagactctcgcagctccagctgatggcgctcgtgtgcgtttacgtgaggaaatccaat
tactttcaacaagttttcaaacgctttgatatcaaccaacagtcttcaaacgctcccaac
ttcggattttcgaaggcactaaacggtttcctaatgatgatgactcagaatgggaaactg
ctgtacatatcagacaacgcagctgaatatcttggacattccatggaggacctattaatt
cacggcgacagtgtatacgacgtgatcgacaaacaagaccagcaggccgtgaggtcggag
ctgtcgagagcgccgaccgatggcgaagaccgagtgttcctgtgtcgtatgaacgtcgcg
aggaatgcccggagacagatgcgatttggagatcagaaggtggtgctagtacgaggtcac
tacgtgtcttatttgccgctctgcagtcgcaacgagccggtgttcctcgcagcctgcacc
cctctcgccatgccggaaacgcgagagtgcgttgtgcacggcgccaccaatgtgttcacg
accgtccacgcgatggacatgaagatactccatattgattccaatagcgagtggcatctg
ggctgggagcgaagttcgctacacggtgtcagctggtaccatctcctgcacccagattgt
attaaggaagctcaaaacaagcatcgattaataacgcaatcggagcaggaacgatcttgc
atcgctctgctgcggctgcagcggcgctgcggacaatttctatgggtgcatgcggtgctg
caactcaaagacaacctcgagaattcgcagcgccctgtcattgtgtgcactaaccaggtg
ttaagtgaacaggaagcagcagtgatgaaagcaaatccatggctataccattattacgca
gtgcaatcgaaactgcattatggcttagcatatgaagcagctacgagaatgtatggtcca
ccgccgcctgatatacaagtgtatcctacaactatgcagtacgcgccaacaccaccagtc
tgtataaatggaaatcaagcagtcatgatgccaaattcgagcctacagcctcatataccg
cacgtgccgccacacttaacaccaatacattacgcctatgaaagacatgacaacggtcca
gttgattattcggtgtcacttcatgagaacagataccataatttaaggattgatgaatca
cgatcacacccaagtgctaaaaggaaagcaaaacaatcggacgataaaacacccgttgct
aatttgtctccacgtttctctgcgtccaatattggaggtgaaaccttggtagcaatagca
gcaacatctataaccaatcgaaggccaggatctaagaattttagcttaaccgaaacggaa
atgatcgatcaatggaatcctagtccaacttggtcggaatctgcattacagaaagttccc
gatgtttgtcaccaagatttaagtccatatgttacaactacaccaccaacaccctctggt
acaccgtcggcttatacgcagaattatagtcatacatttgtgtttgattggtcaccagaa
caatacgttcctcatactaacaatagatgtagcacagtaacaacagaaagttcctatcag
caaacttggaatagaaatcaaagaatgacattcgctagtagtaatgataattctatcgat
gaaaattgtaatcctaatagaataaacttgcctatgagggttagccgaacaccgccagaa
cataattcactacgggaaggagaaactcttcgaaggcaaatggatcgtccgcatccagat
tcaccaggtgccaaaaagcctgcattataa
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