Vanessa cardui (painted lady): 124538805
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Entry
124538805 CDS
T09161
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124538805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcd03021
]
124538805
03036 Chromosome and associated proteins [BR:
vcd03036
]
124538805
Transcription machinery [BR:
vcd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124538805
Chromosome and associated proteins [BR:
vcd03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124538805
PBAF complex
124538805
GBAF(ncBAF) complex
124538805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Chromo
TMEM51
Motif
Other DBs
NCBI-GeneID:
124538805
NCBI-ProteinID:
XP_046971966
LinkDB
All DBs
Position
21:complement(6492203..6508978)
Genome browser
AA seq
944 aa
AA seq
DB search
MTTLGPKKDGGPNIEFFQSAESLSQFDQIRVWLQKNCKKHVQTDPPTKEGLAQLVIQLIQ
YQENKLGKNATDPPFMRLPMKVFMDMKPGGSLCTVLATMFRFKSEQRWRKFDFQVGKNPS
RKDLNVQMMMEIESSLLGAEVIRSPCIFIRPEVDKATANKVKDIIVNHQGEICEDEEDAT
HIIYPAVDPLEEEYARPVFRRGNSVLVHWYYFPDSHDTWAQSDLPVEVPESASWECSRAE
PWRVAATWALDLPQYNEWMNEEDYEVDANGKKKVHKLRLSVDDLIPGSEPSGKSKKGKRK
RSPSPPPQKHGKRKSRVAKRRDNDGDEEEDNASRDNTDVAPTPESERSTDSXLIINQQQQ
QQPVNSHSPAPAASAAEASAAPDAPATPAPAMDAHDDSQGKHSDSNTQEMLTKEELEDNV
TDQTHHIVVPSYSAWFDYNSIHTIEKRALPEFFNNKNKSKTPEIYLAYRNFMLDTYRLNP
TEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLVNYQVETESRPTAMGPPPTSHFHVLSDT
PSGLQPLQARPTQPRPAENVAVPKVEAGLPNGADAGAPVKPEPSVKAEPTIELGTAPGLK
IDQYRGGARGREWTEQETLLLLEALELHRDDWNRVAAHVGSRTHDECILHFLRLPIEDPY
LNDTSASGVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASKATRAAMDEFSAIKDE
VPAAMMEAHVKAAGAHGPAAALAATGIAGTAPAAPTVEKKEGSEVKQEAMEVDGEGEAKV
KEEPAEAPPADEAKEAKDDATPPPEAPAAVDSKVQSAAAAALAAAAVKAKHLAGVEERKI
KSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEF
RARNHAIQRLQAESGGAVVAASAAPGAPEAPPSEAPQPPPAHHA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgacaactctaggccctaagaaggatgggggcccaaatatagagttctttcagtcggcg
gaatcattgagtcaatttgaccaaattcgtgtgtggttacagaaaaactgcaaaaagcat
gtccaaactgatccaccaaccaaggagggactggctcaacttgtcatccagcttatccaa
tatcaggaaaacaagctaggaaaaaatgcaactgatcctccgtttatgagacttccaatg
aaagtattcatggacatgaaaccgggcggttccctgtgcacggtgctcgccaccatgttc
cgcttcaagtcggagcaacggtggcgcaagttcgacttccaggtcggtaagaatccgtcc
cgtaaagacttgaacgtgcaaatgatgatggaaatcgaatcttctctcctgggagctgaa
gtgatacgctcaccctgcatcttcatacgtccagaagtagacaaagcaacagctaacaaa
gtcaaggatatcattgtaaatcatcagggagaaatatgtgaggacgaagaagatgcaacg
catataatttaccccgcggtagatccccttgaggaggagtacgctcgaccagtgttcaga
cgcgggaacagcgttctcgtacactggtactacttcccagacagccacgacacctgggca
cagtctgacctaccggtggaggtgccggagagcgcgagctgggagtgcagtcgcgcggag
ccctggcgcgtggcggccacgtgggcgctcgacctgccgcagtacaacgagtggatgaac
gaagaggactacgaggtcgacgccaacggcaagaagaaggtacacaagttgaggctgtcc
gttgacgatctgattcccggatccgagccatcggggaaaagtaaaaagggcaagaggaag
cgatctccctcgccgccgccacagaagcacgggaagagaaagagtcgtgtggcgaaacgc
cgcgacaacgacggcgatgaggaagaggacaacgcgtccagagacaacactgacgtcgcg
cccacaccggagagcgagcgctcaactgacagttagttaataattaatcaacaacaacaa
caacagcctgtaaattcccactcgccggcgccggccgcgagcgcggcggaggcgagcgcg
gcgcccgacgcgcccgccacgcccgcgcccgccatggacgcgcacgacgactcgcagggc
aagcacagcgactccaacacgcaggagatgttgactaaggaagagttggaagacaacgtg
acggatcaaactcaccacatcgtagtgccgtcgtactcggcgtggttcgactacaactcc
atacacaccatcgagaagagagcgctgcctgagttcttcaacaacaaaaacaaatcgaag
actcccgagatatatctggcgtataggaacttcatgctggacacgtaccgcctcaacccg
acggagtacctcacgagcacggcgtgtcgccgcaacctcgcgggcgacgtgtgcgccatc
atgcgcgtgcacggcttcctcgagcagtgggggctcgtcaactaccaggtggagacggag
tctcgcccgacagccatgggaccgccgcccacgtcacacttccacgtgttgtccgacaca
ccgtccggcttgcagccgttgcaggcgagacctactcaacctagaccagcagagaacgta
gcggtaccgaaggtggaggccggcctgcccaacggcgcggacgcgggcgcgcccgtcaag
cccgagcccagcgttaaggcggagcccaccatcgagctgggcaccgcgcccgggctcaag
atcgaccaatatcgtggaggcgcccggggacgcgaatggacagaacaggagaccctctta
ctgctggaagccctggaactgcaccgagacgactggaaccgcgtggcggcgcacgtgggc
tccagaacgcatgacgagtgtatcctgcatttcctgagactgcccattgaagacccatat
ctgaatgatacctcagctagtggtgtcctgggtccgttggcttaccagcccattccattc
agcaagaccggcaatcctgtgatgagtacggtcgcgttcctggcttccgtagtcgacccg
cgcatcgcttccaaggccactagagctgctatggacgaattttctgctattaaggacgaa
gtcccggcggccatgatggaggcgcacgtgaaagccgccggcgcgcacgggcccgccgcc
gcgctcgccgccaccggcatcgccggaaccgcgcccgccgcgcccacagtagagaagaaa
gaaggctcagaggtaaaacaagaagcaatggaagttgatggggagggcgaagcgaaggtg
aaagaggaaccggctgaagcgccgcccgcagacgaggccaaagaggccaaggatgatgct
acaccgcccccagaagcgccagctgcggtagactccaaggtacagtcagcggcagcggca
gcactcgccgctgccgccgtgaaggcgaaacatctcgcaggggtcgaggagcgcaagata
aagtccctcgtggctttactcgtagaaacgcagatgaagaagctggaaatcaagctgaga
cactttgaagagctcgaggcaaccatggagagagagcgagagggtctcgagtatcaacgg
caacagctgatacaggaacgtcaacagttccacctggaacagttgaaggcggccgaattc
cgggcgagaaatcacgccattcaaaggctgcaggcggagtcggggggcgcggtggtggcg
gcgagcgcggcgcccggcgcgcccgaggctccgccctcagaggcgccgcagcccccgccc
gcgcaccacgcctga
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integrated database retrieval system
