Vanessa cardui (painted lady): 124538809
Help
Entry
124538809 CDS
T09161
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03022
Basal transcription factors
vcd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124538809
09124 Replication and repair
03420 Nucleotide excision repair
124538809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcd03021
]
124538809
03400 DNA repair and recombination proteins [BR:
vcd03400
]
124538809
Transcription machinery [BR:
vcd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124538809
DNA repair and recombination proteins [BR:
vcd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124538809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
124538809
NCBI-ProteinID:
XP_046971971
LinkDB
All DBs
Position
21:complement(9728616..9739247)
Genome browser
AA seq
569 aa
AA seq
DB search
MTTSSEDVLLSVGHVRYKKGDGTLYVMNQRLAWMMENRDTVAVSHKYADIKTQKISPAGK
PKVQLQVVLHDGTCSTFHFVNPAGADAQAKDRDQVKMLLQNLLPKFKRQIDGELEMKSRL
LSLHPTLKHLYEDLVISKVINSEEYWNTPTLKHYTESTNMKQEAGVSGAFLADIQPQTDG
CNGLKYNLTQDIIDAIFKTYPAVRKKHIDYVPNKMTEAEFWTKFFQSHYFHRDRIASSSS
KDLFGECAKMDDQAIASAMKHTTLDLTVDLPQFTEPVPLLPEEDSGEKEKDGTSIHRSMI
KRFNQHSIMVLKASHKTNSSSSSNSSSKTTNNNKVENGMKETNGVDKRPTTDKDPSEPVD
KKRRIMEKLHYEDLDSVNSGQDAQELKLSKVERYLLGPASQVSQSSTSTNNPPPLSALAS
VCQAWSSGQQCQRPVRVSAAAAVGALGELSPGGALMRQHHAACMAQLVPQDVKSELNRLY
LSGGELLRELWRCFPQPGAGNDSEDTPARAEKFYEALLRFRNVKLRPFEEKMLRDLTPLA
TSLTKHMNQMIDTACAKYALWQQRQAKLR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgactacgtcgtcagaagatgtattactgagcgtggggcacgttagatataaaaaaggt
gatggcaccttatatgttatgaatcaaagactggcttggatgatggaaaatcgtgataca
gtcgctgtatcacacaagtatgcagatattaaaacacaaaaaatctctcctgccggcaag
ccaaaggtacagctgcaagtcgtccttcatgatggaacatgttcgacatttcattttgtt
aacccagctggtgccgatgctcaggcgaaagatagggaccaagtaaaaatgctacttcag
aaccttttacctaagttcaagagacaaatagatggagaattagagatgaaatcaagactc
ctgtcccttcatcctactttaaagcatttatatgaagacttagtgatatcgaaagtaata
aatagcgaggaatactggaatacacccaccttgaaacactatactgaatcaacaaatatg
aaacaagaagcgggtgtgtctggagcattcttagcagatatacaacctcagaccgatgga
tgcaatggccttaaatataatttaactcaagacatcatagatgcaatattcaaaacatat
cccgccgttaggaagaaacacatagactatgtacccaataaaatgacggaagccgagttc
tggaccaaattttttcaatcacattattttcacagagatcgtatagcctcgtcatctagt
aaagatttattcggagaatgtgccaaaatggatgatcaagctatcgcgtcggctatgaaa
cataccacattggatctaacagttgatttacctcaattcacggaacctgtcccgctcctg
cccgaggaagattccggtgagaaggaaaaggacggcacatcaatacaccgcagtatgata
aaacggttcaaccaacattctattatggtgctcaaagctagtcataaaacaaactccagt
agtagtagtaatagcagtagtaaaacaacaaataacaacaaagtcgaaaatggtatgaaa
gaaacgaatggcgtcgataagaggccgacaaccgacaaagatccatcggagccggtcgat
aagaaacggaggataatggaaaagttacactacgaagatcttgatagtgtaaatagtggc
caggatgcgcaggagttgaaattatcgaaggtagagaggtatttattaggtcctgcctcg
caagtcagccagtcaagtacaagcacaaataacccacccccgttatcagctctagcgtcg
gtctgtcaggcgtggtcgagcggtcagcagtgccagcggccggtgcgcgtgagcgcggcc
gccgctgtgggcgcgctgggcgagctcagccccggcggcgcgctcatgcgccagcaccac
gccgcctgcatggcgcaactagttccacaggatgtgaagagtgagttgaaccgtttgtac
ctgtcgggcggcgagctattgcgcgaactctggcgatgcttcccgcagccgggcgccggc
aacgactcggaggacacgcccgccagggcggagaagttctacgaggctctgcttaggttt
aggaatgttaaattgaggcccttcgaggagaaaatgctccgtgacctcaccccactagcg
acatctctcaccaaacacatgaaccaaatgatcgacacagcttgcgccaagtacgcgctg
tggcaacagagacaggcaaagctgcggtag
DBGET
integrated database retrieval system
