Vanessa cardui (painted lady): 124538820 Help Entry 124538820         CDS       T09161                                  Name (RefSeq) protein trachealess isoform X1   KO K09098   neuronal PAS domain-containing protein 1/3 Organism vcd  Vanessa cardui (painted lady) Brite KEGG Orthology (KO) [BR:vcd00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:vcd03000]     124538820 Transcription factors [BR:vcd03000]  Eukaryotic type   Basic helix-loop-helix (bHLH)    Factors with PAS domain     124538820 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PAS_3 bHLH_HIF1A PAS_11 PAS PAS_9 HLH PAS_4 Motif Other DBs NCBI-GeneID:  124538820 NCBI-ProteinID:  XP_046971983 LinkDB All DBs Position 21:8865579..9062777 Genome browser AA seq 868 aa AA seqDB search MEHPGGFASSPWAAMLGHGMHGMMQHEYTHPHAHASMPMDLHVPQAFPYYRYRDEALCWS DRKPSVDGVSNAASVNSRYYAQENCILELRKEKSRDAARSRRGKENYEFYELAKMLPLPA AITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDTPPTSKALKGAQNRRTAAGLAMELF EQHQGTHILQSLDGFALSVAADGRFLYISETVSIYLGLSQVEMTGSSIFDYVHQADHAEI AEQLGLSLAGRSGAGLNSPASGSEEGSQHGTNNPDVSAQMSLAASGSLYRGMDRAFCIRM KSTLTKRGCHFKSSGYRVVLMLCRLRPQYTFSHSRKTPPALLGMVALAIALPPPSVHEIR LESDMFVTRIGFDFRIAHCEPSRVSELLGYTAEELTGKNLYALCHGEDANKLRKCHVDLM NKGQVLTHYYRLMNKLGGYTWMQTCATVVCSSKNAEEQNIICVNYVISGREYPNTVMDCC QLEESVQGVKREETTGDPENGPPDADTPGAPPPPQRHTAERTEAPTNNDSASTAPQTSDV THLTRLNDTQPIPLHTNQERTSPMPARRLKKRKHTTDCEDEAEKDEERRKSSSNPGAAIS PADRDMNKANLALPESTDATSVRDLENAMSKHLPSVALDGKEIAHRPTDFSTDALLKQQQ QKSTIQWIGTQNHHLNHLNRQIPGNHTSTPASALLRQLYANRESVIRSNFLGDGRTGYYS SDGQSGPLPTPPGSEGSGYGEQLGHKGTDIGSLAYGGYADYHSAMTPPGSVSPRDKQQYA LPYDNSAYSEALRHPYLGEAPLPLKPQAYSAVPGALDYASSLDQSQFFHPPSSFHLYHPQ AHSAHASHSHQPVDKSAPPNTNWYSTSS NT seq 2607 nt NT seq  +upstreamnt  +downstreamnt atggagcacccaggaggattcgcatcctccccctgggcggctatgctgggccacggcatg catggcatgatgcaacatgaatacacgcaccctcatgcacacgcatccatgccaatggat ctgcatgtgccccaagcttttccgtattaccggtatcgagacgaggcgctgtgttggtcg gacaggaaaccgtcagtagatggagtgagcaatgccgcttcagttaacagtcgatactat gcacaagagaactgcatactcgagctgcggaaagagaaaagtcgtgacgcagcgcgctcc cgacgaggcaaagagaactacgagttctacgaactggctaagatgctacctctacccgcc gccatcaccagtcaactggataaggcgtcgatcataaggctgacaataagctacctcaag ttacgtgacttctccggtcatggcgacccgccgtggagtcgcgacacgccgcctacgagt aaagccttgaaaggtgctcaaaacaggcgaacagctgctgggcttgctatggagttgttt gagcaacatcagggcacacacatactacagtctctcgacggattcgcgttgtctgtggcg gccgatgggagatttctgtacatatcagaaactgtttctatatacctaggactatcacaa gtagaaatgactggtagcagcatatttgactacgtgcatcaagctgatcacgcagagatt gctgaacagcttggactatcattggcgggaagatctggtgcgggcttgaacagtcctgca tcaggcagcgaagaaggcagtcaacatggaaccaataatccagatgtgtcagcccaaatg agtctggcggcgagtggttcgctgtaccgagggatggatcgagcattctgcatacgaatg aaaagcaccctaacgaagagaggttgccacttcaaatcctctggttacagggtagtactg atgctctgccgcctccgaccgcagtataccttttcacacagtcgcaaaactcctccagca ctcttgggtatggtggcgctggccatagcgctaccaccgccgtcggtccacgaaatcaga ttggagtctgatatgtttgtaacgaggatcggctttgactttcgaatagcgcattgcgaa cccagcagggtatcagagctactgggatataccgctgaagagctcacagggaaaaatcta tacgctctatgtcacggcgaagatgcaaataagcttagaaaatgtcacgtcgatttaatg aacaaaggtcaagtgctgacacattactacagactgatgaacaagctgggaggctacacg tggatgcagacatgcgccacagtcgtctgctcttccaagaatgctgaagaacagaacatt atttgcgttaattatgttataagtggacgtgagtatccaaatactgtgatggactgctgt cagctagaagaaagcgtgcaaggagtaaagcgcgaggagaccacaggggatccagaaaac gggccccctgatgccgatacgcctggagctcccccgcccccacagcgacacaccgctgag agaaccgaggcacccaccaacaatgactccgcatcaactgctccacaaacgtctgacgtc acacatctgaccagactaaacgatacacagcccataccactccacacaaaccaggagaga acctccccaatgccagctagaagactgaagaaacgaaaacacacaacagactgcgaagac gaagcggagaaggatgaagagagacgaaagagttcctcgaatcccggcgccgccatatca cccgccgaccgcgacatgaataaagcaaacttagctcttccagaaagcaccgacgccaca tccgttagagatctagaaaatgctatgtccaaacatttaccatcggtagcgttggatggg aaggaaatagcgcatcggccgactgatttttccactgatgcactattgaaacaacagcaa cagaaatccaccatacaatggattggcactcaaaatcaccacctaaaccatcttaaccgt caaataccaggcaatcatacatcaacgccagcttcagcgttgttaaggcaactttatgca aatcgggaaagcgtcattagaagtaacttcttaggagacggcagaacaggatattattct agcgatggtcagtcaggacccttaccgacaccacccggaagcgaaggctctggatatggt gaacaattaggccacaaaggaacagatataggttccttggcctatggaggatacgcagat tatcattcagcaatgactccgccagggtcagtatctccgagagacaaacaacagtacgct ttgccttacgataatagtgcttattccgaagcgttaaggcatccgtatttaggagaggct ccgttgccattgaagcctcaggcatattcggcggttcctggtgctttggactacgcgtcg tcattggaccaatcacagttcttccatcctccatcctctttccatctctatcatcctcaa gcacattcagcgcatgcgtctcactcgcaccaaccagtagacaagtccgcgccaccgaat actaattggtattccaccagctcatag

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