Vanessa cardui (painted lady): 124538884
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Entry
124538884 CDS
T09161
Name
(RefSeq) regulator of gene activity isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124538884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcd03019
]
124538884
Messenger RNA biogenesis [BR:
vcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124538884
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124538884
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
124538884
NCBI-ProteinID:
XP_046972083
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All DBs
Position
21:6556309..6563249
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AA seq
411 aa
AA seq
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MANLNFQQAPRSLASGGVGGRVGSGLVGGVSGHVTPTFGGALSPGRGSTAMPGGAPPSMA
SRSTLFGQRAFADRRVPMATPLSQANSNSMSSMANLSRFNAGNYHSVFGEGGDTSTPPLL
DLSEFPSLTARGAGDQAPAAAPPPPGSKPYVGMVKQPTSEQSEFTMSSEDFPALPGTSAG
THAPAPPADYAHAPDKPSRKGIQTSPDVISQGAHTEYYGKVTNIPETMIPNQFGIVGLLT
FIRAAESDPSLVSLALGQDLTALGLNLNSPDNLYLTFAGPWADTPCRPQDMDYHVPPEYL
INGSIREKLAPLRLSRYKEDLLFYLFYCFVGDVLQIAAAAELYNREWRYHMEEKVWISQA
PGMPMVEKTSTYERGTYYFFDAHNWRKVAKEFHLDYSKLEGRPQLPPHVLT
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacttgaatttccaacaagcgcctagaagcctagctagtggcggtgttggaggc
agagttggttcaggattggtcggtggtgtatcagggcatgtgacaccaacatttggtggt
gccctgtcacctggacggggttccacggctatgcctggaggagctcctccctccatggcc
tctagatctacgttatttggacaaagagcattcgctgaccgtagagtaccaatggcaaca
ccactgtcacaagccaactcaaattcaatgtcgagtatggcgaatctgtcgaggttcaac
gcggggaactaccattcggtgttcggcgagggcggggacacgtcgacgccgccgctgttg
gacctcagcgagttcccgtcgctgactgcgcggggcgccggcgaccaggcgcccgccgcc
gcgcctccgccccccggctctaagccctacgtgggtatggtgaagcagcctacctctgag
cagtctgagttcacgatgtcgtccgaggacttccccgcgctcccgggcacgtctgcgggc
acgcatgcgcccgcgccgcccgcggactacgcgcatgcgcccgacaaaccatcacggaaa
ggcatacagacatcaccggatgtcatcagtcaaggagcacatacggaatactatggcaaa
gtgacgaacataccagagacaatgataccaaaccagtttggtatagtgggacttctgacc
ttcatcagggcagcggaatctgaccctagtctggtgtcgttagcgttggggcaagatctc
accgcattaggcctcaacctcaactcaccggacaatttataccttacctttgctggcccg
tgggcggatacgccttgcagaccacaagacatggactaccacgtgccccccgagtatctg
ataaacggatctatcagagaaaagctggcaccattacgacttagtagatataaagaggat
ctgttattctaccttttttactgcttcgtgggcgacgttctgcaaatagcagccgcggcc
gaattatacaaccgtgaatggcggtatcacatggaggaaaaggtgtggatctctcaagcg
cccggcatgcccatggtggagaaaacgtccacatacgagcgcggcacatactacttcttc
gacgcgcacaattggcgcaaggtggcgaaagaattccacttagactacagcaagctcgag
ggccgaccgcagctgccgccgcacgtgctcacgtag
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