Vanessa cardui (painted lady): 124538982
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Entry
124538982 CDS
T09161
Name
(RefSeq) nuclear RNA export factor 2-like
KO
K14284
nuclear RNA export factor
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03008
Ribosome biogenesis in eukaryotes
vcd03013
Nucleocytoplasmic transport
vcd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124538982
03015 mRNA surveillance pathway
124538982
03008 Ribosome biogenesis in eukaryotes
124538982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcd03019
]
124538982
03009 Ribosome biogenesis [BR:
vcd03009
]
124538982
Messenger RNA biogenesis [BR:
vcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124538982
mRNA cycle factors
Stress granule specific factors
124538982
Ribosome biogenesis [BR:
vcd03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
124538982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
Top6b_C
Motif
Other DBs
NCBI-GeneID:
124538982
NCBI-ProteinID:
XP_046972232
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All DBs
Position
21:8158096..8164771
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AA seq
539 aa
AA seq
DB search
MNQLGTYYKQYLLNRVSATQTLVEYIENCLVTENEVSEHSYHKIMIYRWTESEVKLFEVL
SEYFAVTFVPVQFETQNIVSTFYTSSLSFVLKIIKLDFMFPHARTMHNMDILFNDKTSQN
LFKQKITIDNIVSSVVSSRFNEMLELNLSNFCNDPKFMEMKIYFYHLTLLSHFKILMIRM
GRDTRILNLNNNNLSQVPLNILNFFIKGELIGINLSNNNIPSLTELQRISSKIEKLWVEG
NPLCEGLDSITYIKQIVQKFPRLTELDGIKLNNHGLMMPFYRNYLAVPDKKTKMLVEKFV
SLYFTHYDSSRRRIDMFYDPMAQMMLSTSFLESEENVVYAVHSRNMLNPEKRQLILNNKR
WYAKRAAIVSVLMQLPKSSHDLSSFNIDVLQHDHNCLILIIDGVFKEEATKVTPERILQF
RRTFIFHIHTVHKKTFYNIVHEMFTVSLASPEIAKNSFKNPVRNLNQLTLINPEQEEKDI
ICTAFMYYTQLKRAEAETRLLSHDWDLRVALKTFAKDCKNDKIHPDKFENTEQPIDEID
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaattaggaacttattataaacagtatttgttaaaccgagtatcagcgacgcaa
actttggttgaatacattgaaaattgcctcgttacagaaaatgaagtatccgaacattca
tatcataaaattatgatctatcggtggacagagagtgaagtaaaattatttgaagtatta
agtgaatattttgctgtaacatttgttccggtacagtttgaaacacaaaatattgtatca
acattctacacaagcagcttatcatttgttttgaagatcataaaactggatttcatgttc
ccccatgccaggaccatgcacaatatggacatacttttcaatgataaaacctcacaaaat
ctttttaaacaaaaaattactattgacaatattgtttccagtgtagtaagctcgagattc
aatgaaatgcttgaattaaatctatcaaatttctgcaatgatccaaaatttatggaaatg
aaaatttatttttatcacttaacacttttgtcacactttaaaatactaatgataaggatg
ggacgagacacaagaatattaaatttaaacaacaataacttaagccaggtgccattaaat
atattaaattttttcatcaaaggagaactaataggaataaatctaagcaataacaatatt
ccgtcattgactgaactacaaaggattagtagtaaaatagagaagctgtgggtagaggga
aatccactgtgtgaaggtctggattcaatcacatatattaaacagattgttcaaaagttt
ccaagattaactgaactggatggaataaagttaaataaccatggccttatgatgccattc
tacagaaactatctcgcagtaccggataagaagacgaagatgttagttgagaaatttgta
tcgctttactttacacattatgattcaagtcgacggagaatagacatgttctatgatcca
atggcgcaaatgatgctctctacgtcgttcttagaatcagaagagaatgtggtgtacgca
gtgcattctagaaatatgttaaatccagagaaaaggcaattaatattaaacaataaaagg
tggtatgcgaaacgcgcagctattgtttcagttttaatgcaactgcccaagtcgtcgcac
gatctttcaagtttcaacattgatgtcttgcaacatgatcataactgtttaatattaatt
atagatggtgtttttaaagaggaagctacaaaagtaacgccagagcgcattttacaattt
agaagaacgtttatatttcacatacatacagtacataaaaagacattttataacatagtt
catgaaatgttcactgtgtcattagcttcgccggaaatagctaaaaacagttttaagaat
cctgtgaggaatttaaatcaattgacgctcattaatcctgaacaagaggaaaaagatata
atttgtacagcttttatgtattacacgcaattaaaaagggcagaagctgaaacccgtcta
ctttctcatgactgggatttacgagtagcactaaaaacatttgcaaaagactgcaaaaac
gacaaaattcatcctgataaatttgaaaatacagaacagccaatagatgaaattgattaa
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