Vanessa cardui (painted lady): 124539012
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Entry
124539012 CDS
T09161
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124539012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcd03009
]
124539012
Ribosome biogenesis [BR:
vcd03009
]
Eukaryotic type
Pre-60S particles
RNases
124539012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
124539012
NCBI-ProteinID:
XP_046972271
LinkDB
All DBs
Position
21:complement(7330722..7334413)
Genome browser
AA seq
1049 aa
AA seq
DB search
MLPSTGYFKGINCPFYDSGLCERPYCHFRHVKKEPQNVCNDGMESGAILQKLVSAAVQKV
LQQTESGTSSSTQATPDTEANNLKPQSSKATYNPTPIAELNKINNTDSDNDDTNEQKKRH
IPVPYTPRKPASLPIKRPVDTNGSKLFTYLPPVKYTPGSETVPLDPYTPKGSSESKEKYL
PGSEAEIPEYTLNETQNSKVNYIPSDKNVNKKKILEYKPTKVKSQLPSVTYQPTPKSLVP
CFSSDEDEPDTKKRKLSNDLNGLDDLGPEFDILDQILDEEKTDKDIKNIPQKDSKECKEN
RHKTKSSKSDKHKSDSKKSDKDRSNKLIEKTSEKKDSPDKKTSSDKKSSHKSSSKDKNRS
ERKDKSDKKSHSRDKSSDSSSKHSRSSSSKHSKHESKAKDVQHIDNNHHKSHRHKESKEK
REKHKKKHDKSATKIKSDNEEDHNYDELIEDELNELSESDEETIAQECKRIFEEYVPTKK
INKIEPDKLENETENEEIITQSKKRISRTIEKNIKILPKAPVKPDFKGNAAQAMAERLAK
VREFHAAKSTNENVMTTNLVPKPDITKSSSKIRIAHVPYASTLLSAKKVIPSSVSSVKQT
DPSPSTSIQTVKKGTQRVAHIPNEKFIDRPGVLEPLGSKIPVNIRSTYLNLMIDHSLKIY
ISATDAYARAQHEELATSKKCSTVQIYKNSAVLTISRLKKELQECNGVKKSGGDLSTLQK
GGQQGTVSKSCTAGSWSIESKNRNNAIDTKQLTGAKLYNYIKKWILTEEQLIQNGYPRPH
SSGVKGRAIIYGQNKQNPPKGFIRTCCRCKKNYTVDKKGFAAIKEECIYHPNNKYRVRGE
ARYQCCSQDGTSDGCCIASSHVYEYVDFENLKGYVKTLPPENIMEDYGVYSLDCEMCYTT
QGLDLTRVTVIDAACKVVYETLIKPLHPIIDYNTRYSGITEEQMAEVKTTLLEVQATLLA
MFTSQTILIGHSLESDFKALKLIHDTVIDTSVLFPHKMGPPYKRALRNLSSEYLKKIIQN
SVDGHDSAEDACVCMELILYKVKEDLKTR
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgttaccctcaacgggttattttaaagggattaattgtcctttttatgacagcggattg
tgtgagcgtccctattgccattttcgtcatgttaagaaagaaccacaaaacgtttgtaac
gatggaatggaaagcggagctattcttcaaaaactggtgtcagctgcagtccaaaaagtt
ttacagcaaaccgagagtggcacatcttcatcgacgcaagctactcctgacactgaggca
aataacttaaaacctcagtcgtccaaagctacttacaaccctacaccgatagccgaacta
aataaaataaacaataccgattctgataacgatgatactaatgaacaaaaaaagagacat
attcctgtgccatatacaccgagaaagccagctagtttgccgattaagagacctgtagat
actaatggttcaaagctattcacttatttaccacctgtaaagtataccccaggttctgaa
actgtaccgttggatccttatactccaaaaggatcgagtgaatcaaaagaaaagtacttg
cccggatcagaagctgaaataccagaatatacacttaatgagacacagaattccaaagta
aattatatcccttctgataaaaatgttaataaaaagaaaatattagagtataaaccgaca
aaggttaaaagtcaattaccatctgtcacctaccaaccaacaccaaaatcattagtccct
tgtttttcaagtgatgaagatgaaccagacacaaagaaaagaaaactttcaaatgatctt
aatggattagatgacttaggaccagagtttgatattttagaccaaattcttgatgaagaa
aaaacagataaagatattaaaaacataccacaaaaagattctaaggaatgtaaagaaaac
aggcataaaacaaaaagctctaaatcagataaacataaaagtgactcgaagaaatctgat
aaagatagatcaaacaaattaatagaaaaaacgagtgagaaaaaggattccccagataaa
aagacaagttctgataaaaaaagtagtcataaaagttcaagtaaagataagaacaggtct
gagagaaaagataaatcagacaaaaagtcacattcaagagacaaaagttcagatagtagt
tctaaacattcaagaagtagttcatcaaaacattcaaaacatgaaagtaaagctaaagat
gtacagcacattgataacaatcatcataaatcacatcgccacaaagaatctaaagaaaaa
agggaaaaacataaaaagaaacatgataaatcagctacaaaaataaaatctgacaatgaa
gaggatcataattatgatgaactcattgaagatgaattaaacgagttgtcggaatctgat
gaagaaactattgcacaagaatgtaaaagaatatttgaagagtatgtaccaactaaaaaa
ataaacaaaatagaacctgataagttagaaaatgaaactgaaaatgaagaaatcataaca
caaagtaaaaaacgaatatcaagaactattgaaaagaatattaaaatattacccaaagct
ccagtgaaacctgattttaaaggtaatgctgctcaagctatggcagaaagattagccaaa
gtacgagaatttcatgctgcaaaaagtactaatgaaaatgtgatgactacaaatttagtt
ccaaagcctgatattactaagagtagttctaaaattcgcattgctcatgttccctatgca
tccacattgttatctgcaaaaaaagttattccttctagtgtaagctctgtcaagcaaaca
gacccctctcctagtacatctatacaaactgttaagaagggtacccaaagagtggcacac
ataccaaatgaaaagtttatagatagacctggggttcttgaaccacttggttcaaaaatt
ccagttaatataaggtcaacatatttaaatcttatgatcgatcacagcttaaaaatatac
atctcagcaacagatgcttatgccagagcccagcatgaggaattagcaacaagtaaaaaa
tgttctactgtacaaatttataaaaattctgcggttctgacaataagtagattaaaaaaa
gaactacaagaatgtaatggagtaaagaaatctggaggagacttatcaacattacaaaaa
ggaggacaacaaggaacagtaagtaaatcatgcacagctggttcatggagtatagagagc
aaaaatagaaataatgctatagacacaaaacagttaactggtgctaagctgtataattat
ataaaaaaatggattttaacagaagaacaactaatacaaaatggatatcccaggccacat
agtagtggtgtaaaggggagagctatcatatatggtcagaataaacaaaatcccccgaaa
ggctttataagaacttgttgcagatgtaaaaagaattatacagtagacaaaaaaggcttc
gcagcaattaaggaagagtgtatttaccaccctaacaataaatatagagtgaggggcgag
gctcgctatcagtgctgcagtcaggatgggacttctgatggttgttgcatagcttcaagt
catgtttatgaatatgttgatttcgaaaatctaaaaggttatgtgaaaaccttaccacct
gaaaatataatggaggattatggtgtatactcattggactgtgaaatgtgctatacaaca
caagggttagatttgaccagggtaacagtaattgatgcagcatgtaaagtagtatatgag
actcttatcaagcctcttcatccaattattgactacaatacaagatattcaggaatcact
gaagaacaaatggcagaagtaaagactacgcttctggaagtacaagcaacactacttgct
atgtttactagccaaactattttgataggtcatagtttagagtctgattttaaagcactt
aaacttatccatgatacagttattgatactagtgtcttatttccacacaaaatgggtcca
ccatacaagagagcattaagaaacctatcatcagaatacttaaaaaaaattattcaaaat
tcagtagacggacatgacagcgctgaagatgcatgtgtgtgcatggagcttattctttat
aaagtaaaagaagatcttaagactagatga
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