Vanessa cardui (painted lady): 124539289
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Entry
124539289 CDS
T09161
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124539289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcd03019
]
124539289
Messenger RNA biogenesis [BR:
vcd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124539289
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
124539289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
124539289
NCBI-ProteinID:
XP_046972580
LinkDB
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Position
22:complement(6023936..6027473)
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AA seq
250 aa
AA seq
DB search
MPPPDLLSSQGLRLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKVLAAVYGPHQAAK
SKSSVEGVVVNCQYSMATFSTGERKNRPRGDRKSQEMSLHLRQALTAAIKTELYPRSQID
IYIEVLQADGGAYCASVNAATLALVDAGVPLRAYACACSASMAWRGAKPEPLLDVGHVEE
AAGGVVLTVASLPSTGSIALLELSHRLHSDYFEMVLSRAMQGCKDIEIVLDKAVREHLAE
GWTKQDVVTI
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaccagatttgttatctagtcaaggattgcgtctagacggtcggaggcctaac
gagttacgtagaataagatgtaaactaggagtttttactcagcctgatggaagtgcatat
ttggaacagggaaatacgaaggttttagctgctgtttatggccctcatcaggctgctaag
tccaaaagctcagtagaaggagttgttgtcaattgtcaatacagtatggccacattttca
actggtgaaagaaaaaatagaccacgaggtgatcgcaagtcacaagagatgtcactccat
ctaaggcaagcattaacagccgccatcaagacagaactgtacccacgttcacaaatcgac
atttatatagaagttttacaggcagatggaggtgcatactgcgcaagcgtgaacgcggcg
acgctggcgcttgtggatgcgggcgtgccgctgcgtgcgtacgcttgtgcatgcagcgcc
tccatggcgtggcggggggcgaagcccgagccattactggacgtgggccacgtggaagag
gcggcgggtggcgtcgtgctcaccgtagccagcctacccagtaccggaagtattgctctg
ttggaattatctcacagactacacagtgattatttcgaaatggtcttaagtagagctatg
caaggctgtaaagatatagagattgttcttgataaagcagtgagagagcatttagcagaa
ggatggacgaaacaagatgttgtaacaatatga
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