Vanessa cardui (painted lady): 124539412
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Entry
124539412 CDS
T09161
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124539412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcd03041
]
124539412
Spliceosome [BR:
vcd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
124539412
Complex C
U4/U6.U5 tri-SnRNP related factors
124539412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
124539412
NCBI-ProteinID:
XP_046972760
EnsemblRapid:
ENSVCAG00000014164
LinkDB
All DBs
Position
22:complement(6891708..6893620)
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AA seq
289 aa
AA seq
DB search
MANRTVKDAKSIRGTNPQYLVEKIIRSRIYDSKYWKEECFALTAELLVDKAMELRYIGGV
HGGFIYPTPFLCLLLKMLQIQPEKDIVVEFIKNEEFKYVRALGAFYMRLTGTSLDCYKYL
EPLYNDNRKLRRQNREGQYELIHMDEYIDELLREERLCDVILPRIQKRHILEENNELEPK
VSALDDDLDEDVPSDEEIVDTETKENKREKDRRERDRRRDRSRDRERRDKDRKRERSRSR
ERDRRWDRERERERERERDRERIRDRERDREKERRERHEVDRRRDRGRY
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcggaccgtaaaggacgcgaagtccatccgtggtacaaatccacaatattta
gtggaaaagattatacggtctcgtatttacgattcaaaatattggaaagaagaatgtttt
gctttaactgcagaattattggtcgacaaagctatggaattacgctacataggcggcgtg
cacggcggtttcatttaccctacaccgtttctctgtttacttttaaaaatgctacaaata
caacctgaaaaagatattgtagttgaatttattaaaaacgaggaatttaaatatgtacgt
gctctaggtgccttttatatgagacttactggtacatccctggattgttataaatattta
gagcccctatacaatgataacagaaagttacgacgtcaaaatcgtgagggacaatacgag
ttaatccacatggatgagtatatcgatgagttgttacgcgaggaacgcttatgtgatgtt
attttaccgcggatacaaaaaagacacatacttgaagaaaataatgaattagaacctaaa
gtcagtgctctggatgatgatttggatgaagatgtaccttcagatgaagaaattgttgat
acggagaccaaagaaaataaaagggaaaaggatagacgtgagagagatagaagacgagac
agatctcgtgaccgtgaaaggcgggataaggaccgtaaacgagaaagatcaagaagcaga
gaacgtgacagacgatgggacagagaacgagaaagagaacgtgagagagagcgtgataga
gaacgtattcgtgatcgtgaacgggacagagaaaaggagagaagggaacggcacgaagtt
gatagaagaagagatagagggcgctattag
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