Vanessa cardui (painted lady): 124539683
Help
Entry
124539683 CDS
T09161
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcd04131
]
124539683
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcd04147
]
124539683
Membrane trafficking [BR:
vcd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
124539683
Exosome [BR:
vcd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124539683
Exosomal proteins of bladder cancer cells
124539683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
Beta-prop_WDR5
B-prop_COPA_B_2nd
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
TPR_COPA_B
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_EIPR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Zn_ribbon_15
Motif
Other DBs
NCBI-GeneID:
124539683
NCBI-ProteinID:
XP_046972962
LinkDB
All DBs
Position
23:complement(7645104..7664479)
Genome browser
AA seq
1228 aa
AA seq
DB search
MLTKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFH
IQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTSFHHEYPWILSASDDQTIRIW
NWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPGPSGLA
EHLRNPQATDLFGQADAVVKHVLEGHDRGVNWASFHPTLPLIVSAADDRQVKLWRMNDAK
AWEVDTCRGHYNNVSCALFHARHELILSNSEDKSIRVWDMTKRTCLHTFRREHERYWVLS
SHPTLNLFAAGHDAGMILFKLQRERPAYALHNNMLFYIKDRQLRKLDMSTNRDAPVMQIK
GGGRHQPYSMSLNHAEWCVLVSWRAGDSSSYELYAAPRDGAEPAAPPEPLRGHAASAVWV
ARNRFAALERNNQLVIKNLKNEVSKKIATPTCEEIMYAGTGMLLLREPETVQLLDVQQKR
TVASVKVSKCRYAIWNADMSLVALLGKHTVTICTKKLEQLCSITEGARVKSGAFDDSTPQ
PVFIYTTANHIKYCCKDGDYGIIRTLDVPVYAVKVIANETGARVVCLDREARPKVLNIDP
TEYRFKLALVTRQYDQVLHMVRTAKLVGQSIIAYLQEKGYPEVALHFVKDARTRLSLALQ
CGNIDVALEAAKSLDEPDAWDQLAQAALTTGNHQIVEMCYQRTKNFDKLSFLYLITGNLD
KLRKMMKIAEIRKDVSSQFQGALLLGDVTERIRLLKNAGQLSLAYLTAINHKQFEEAEQL
KAALEAANLPVPAANPDAVFLMPPLPVQKAQPNWPLLAVSKSFFEVAGAARTAGEAGVSA
VAAAATDEPLEAGGAWGDDDELQGDAEEPEEVMEDACDDGGWDVGDEDLELPEELAPIQP
DIDGGEESAEYFVAPTRGQGAALGAKLRTAHDYVATGQFEIACRLLHEQVGVVQFAPYAD
AFLGMFARARLQFGALPLVPPLTAHLHRNWKEASGKDLLPVLTVKLNDLVAQLQQCYQLT
TSGKFTEAIERLQRLVRLVPLLQLETKQELAEAMQLLAICRDYLLGLQMETARKAMPKNT
LEEQKRTCEMAAYFTHCKLQPVHQILTLRTALNMFFKLKNFRTAASFARRLLELGPRPEV
AQQARKILQACEKTPTDEHQLLYDEHNPFNICGISYKPIYRGKPEEKCSLCGASFMPEHK
GKLCPVCGVAEIGKDVLGLRICPLQFQR
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgaaatttgaaacgaagtcagcgagagtgaagggtatatcgtttcacgcgaag
agaccatgggttttagcgagtctccacaatggggtgattcagctgtgggattatcgtatg
tgtacattattggagaagtttgatgaacacgacggtccagtacgtggtatatgtttccac
atacaacagccattgttcgtttctggtggagatgattataagataaaggtttggaattat
aagcaaagaagatgtctttttacattgcttggacatttggactacatccgaacaacatcc
ttccaccatgagtatccttggatcttaagtgcatctgatgatcagacaataagaatatgg
aactggcaatcgagacagtgcatcagtgtgctaacaggccacaatcactatgtgatgtgt
gctcagttccacccgacagaagacctacttgtatctgcgtctttggaccaatcagttagg
gtttgggacttctcagggttgaggaagaagagtgttgcccctggaccctctggtttagcc
gaacacttgaggaacccacaagcgacagacttgttcggacaggcggatgctgttgtcaaa
catgttttggaaggtcatgaccgtggtgtaaattgggcttccttccaccccacattacca
ctgattgtttctgccgctgatgaccgtcaagtaaagctttggcgtatgaatgatgctaag
gcatgggaagtggacacatgtcgtggtcactacaacaacgtatcttgtgcgctattccac
gcgcgtcacgaactcatcctgtctaacagcgaggacaaatccatcagagtctgggacatg
actaaacgcacctgcttgcacacattccgaagagaacatgagcgttactgggtgctgtct
tctcatccaaccctgaacttgttcgccgccggtcacgacgctggtatgatcctgttcaag
ctgcaacgtgagcgaccagcatatgcgttacataataatatgctattctatataaaggac
agacaactgcgcaagttagacatgtctacgaacagagatgcaccagtgatgcaaatcaaa
ggcggcgggcggcaccaaccatacagcatgtctctgaaccacgcggagtggtgcgtgctg
gtgtcgtggcgcgcgggcgacagcagctcgtacgagctgtacgccgcgccgcgcgacgga
gccgagcccgccgcgccgcccgagccgctgcgcgggcacgccgcctccgcggtctgggtc
gcgcgcaaccgcttcgccgcgctcgagcggaacaaccagctcgtgataaagaatctgaag
aatgaggtgtcgaagaagatagcgacgccgacgtgcgaggagatcatgtacgccggcacc
ggcatgctgctgctgcgcgaaccggaaaccgtgcagctgctggacgtgcagcagaagcgc
accgtggctagcgtgaaagtgtccaaatgtcgctacgctatctggaacgcggacatgtct
ctcgtggcgcttctcggcaagcacacagtcacgatatgcacgaagaaactcgagcagctc
tgttcgatcacggagggggcccgagtgaagtcgggggccttcgacgactccacacctcaa
ccagtattcatttatacgacggctaaccatatcaagtattgctgtaaagatggcgactac
ggtatcatccgcacgctggacgttcccgtgtacgcagtgaaggtgatcgccaacgagacc
ggcgccagggtcgtgtgcctggaccgcgaggcgagacccaaggtgctcaatatcgaccct
acagagtacaggttcaagctggcgctggtgacgcgtcagtacgaccaggtgctacacatg
gtgcgcaccgccaagctcgtggggcagagcatcatcgcctatctgcaagagaaaggctac
ccggaagtggcgctgcacttcgtgaaggatgcgcgtacgcggctgtcgctggcgctgcag
tgcgggaacatcgacgtggccctggaggccgccaagagcctggacgagcccgacgcctgg
gaccagttagcgcaggcagcgctcaccaccggaaaccaccagattgtagaaatgtgttac
caacgtaccaagaacttcgataagctctcattcctgtacttgatcaccggaaacttggac
aaattacgaaagatgatgaaaattgccgagataaggaaggacgtgtcttcgcaattccaa
ggtgccttactactgggtgacgtcactgagaggatcagactattgaagaacgctgggcag
ctgtccctagcttacctcactgctatcaatcacaagcagtttgaagaagcagagcaacta
aaggcagctctagaagcagccaacttgccggttccagcagcgaacccggatgcagtgttc
ctgatgccaccactacctgtacagaaggctcaacccaactggcccttactcgctgtttct
aagagtttcttcgaagtggcgggagcggcgcgtacggcgggcgaggccggcgtgagcgca
gtggccgccgccgccaccgacgaaccgcttgaggccggcggcgcttggggggacgacgac
gagctgcagggcgacgcggaagagcctgaagaagttatggaggatgcgtgtgacgatggc
ggctgggacgtcggggacgaggatctagagctgcccgaagagttggctccaattcagccg
gacatcgacggcggcgaggagtcggcggagtacttcgtggcgcccacgcgtgggcagggc
gcggcgctgggcgccaagcttcgcacggcgcacgactacgtggccaccgggcagttcgag
atcgcctgcaggctgttgcatgagcaagtgggcgtggttcagttcgcgccgtacgcggac
gcattcctgggaatgttcgcgcgtgcgcgtcttcagttcggcgctctgccgctggtgccg
ccgctaaccgctcacctgcaccgcaactggaaggaggccagcggcaaagacctgctaccc
gtgctcactgtgaagctgaatgacttggtagctcaactgcagcagtgctatcagctgaca
accagtggcaagtttacggaagcgatcgagcgattgcagcgcttagtgcgactcgtaccg
ctgctacagctggaaacaaagcaagagctggctgaagcaatgcagttactagccatctgc
agggactacctactgggattgcagatggagacagccaggaaagcaatgcctaaaaatacc
cttgaagaacagaagcggacatgtgaaatggccgcctacttcactcactgcaagttgcaa
cctgtccaccaaatcttgaccctcaggacagctctgaacatgttcttcaaactgaaaaac
ttcagaacggctgcgtcattcgccaggaggctgctggaactcgggcccaggcctgaggtg
gcgcaacaagcgaggaagatcctacaagcctgcgagaaaaccccaacagatgaacaccaa
ctgttgtatgacgaacacaaccccttcaacatttgcggaataagttacaagcccatatat
agaggaaagccagaagagaaatgctccctgtgtggcgcgagctttatgccagaacacaaa
gggaagttgtgccccgtgtgcggggtggcggagatcggtaaagatgtattgggactaaga
atctgtcccttgcagttccagagataa
DBGET
integrated database retrieval system