Vanessa cardui (painted lady): 124539710
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Entry
124539710 CDS
T09161
Symbol
tex
Name
(RefSeq) THO complex 3 homolog tex
KO
K12880
THO complex subunit 3
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03013
Nucleocytoplasmic transport
vcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124539710 (tex)
09122 Translation
03013 Nucleocytoplasmic transport
124539710 (tex)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcd03019
]
124539710 (tex)
03041 Spliceosome [BR:
vcd03041
]
124539710 (tex)
Messenger RNA biogenesis [BR:
vcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
124539710 (tex)
Spliceosome [BR:
vcd03041
]
Complex C
Other components
EJC/TREX
124539710 (tex)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124539710 (tex)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WDR55
WD40_Gbeta
EIF3I
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_NOL10_N
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_Vps41
PAC11
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Tricorn_2nd
DSE1_N
WD40_RFWD3
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR35_TULP_N
TRM82_WD
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_ELP1_1st
Beta-prop_WDR11_1st
Beta-prop_NUP159_NUP214
Beta-prop_Nup120_160
PD40
CNH
Motif
Other DBs
NCBI-GeneID:
124539710
NCBI-ProteinID:
XP_046973005
LinkDB
All DBs
Position
23:9321580..9326367
Genome browser
AA seq
328 aa
AA seq
DB search
MKESKQTQTPIEDLAELRSYFASHNVVREYIAHSSKVHSVGWSCDGRRLASGSFDKSVAI
FNLERNRLAQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAAAISTK
GENINIAWSPSGATIAVGNKEDLVSFIDARNYKVVVEEQFNFEVNEISWNSTSDLFFLTN
GLGCVHILTYPGLELQTVLKAHPGTCICIEHDPTGRYFATGSADALVSLWDVNELACLRV
FSRLEWPVRTLSFSFDGRLLASASEDHIIDIGDTETGEKVAEIPVQAATFTVAWHPSRYL
VAFACEDKEPPERKRDAGNVKLWGLSSS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaatctaagcaaactcagacaccgatagaagatttagcagaattacgaagttac
tttgcgagtcataatgttgtgcgggagtatatagcccatagctccaaagtacattctgtc
ggctggtcttgcgatggtagaagattagcttcaggttcttttgataaaagtgttgcgatt
tttaatttggagagaaacagactagcacaagattttatattcaaaggacataccggctcg
gttgatcaactatgctggcatgcctcacatcctgatttattaagcacagccagtggagac
aagtcagtgcggatatgggatactcgatcacacaaatgcgcagcagcaatttcaacaaag
ggagagaacataaatatagcatggtcacccagtggagccacgattgctgttgggaacaaa
gaagaccttgtgtcatttatagatgctcgcaactacaaagtggttgtcgaggagcagttc
aatttcgaagtgaatgaaatctcatggaacagcacgtctgatctctttttcttgaccaat
ggactgggctgcgtccacattctcacttacccgggcctggagctgcagacggtgctgaag
gctcaccccggcacgtgtatctgcatcgagcacgaccccacgggccggtacttcgccacg
ggctcagcggacgcgctcgtgtccctgtgggatgtcaacgagcttgcctgcctcagggtc
ttctccagactggaatggccggtgcgcaccctgtcgttcagttttgacggccgactcttg
gcttcagcgagtgaagatcacattattgatatcggtgatactgaaacaggagaaaaagta
gcagaaataccagtacaagcagccacgttcacagtggcctggcatccgtccagatacctg
gtggcattcgcctgtgaggacaaggagcccccggagaggaaacgggatgctggcaacgtc
aagttgtggggactgagcagtagttag
DBGET
integrated database retrieval system