Vanessa cardui (painted lady): 124539921
Help
Entry
124539921 CDS
T09161
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03015
mRNA surveillance pathway
vcd04391
Hippo signaling pathway - fly
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124539921
09130 Environmental Information Processing
09132 Signal transduction
04391 Hippo signaling pathway - fly
124539921
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vcd01009
]
124539921
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcd03019
]
124539921
03036 Chromosome and associated proteins [BR:
vcd03036
]
124539921
Protein phosphatases and associated proteins [BR:
vcd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
124539921
Messenger RNA biogenesis [BR:
vcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
124539921
Chromosome and associated proteins [BR:
vcd03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
124539921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
InlK_D2
Motif
Other DBs
NCBI-GeneID:
124539921
NCBI-ProteinID:
XP_046973255
LinkDB
All DBs
Position
23:7868063..7927727
Genome browser
AA seq
494 aa
AA seq
DB search
MATTTMVVSPLATQPTPKNKRRLFAEARQNSLQKLSVIFDHGHKNGNGGETTWCFSQVKG
TLEDDVTEADLISCVEFNHDGELLATGDKGGRVVIFQRDPASKQCVPKKGEYNVYSTFQS
HEPEFDYLKSLEIEEKINKIRWLKRKNQAHFLLSTNDKTIKLWKVSERDKRVTGYNTREE
GGRPRDPTRVTALRVPTVRPADLMVEASPRRIFANAHTYHINSISLNSDQETYLSADDLR
INLWHLEITDQSFNIVDIKPANMEELTEVITAAEFHPTECNLFVYSSSKGTIRLCDMRAA
ALCDRHAKLFEEPEDPHARSFFSEIISSISDVKLSNSGRYMMSRDYLGLKVWDLRMETKP
VETYPVHEYLRSKLCSLYENDCIFDKFECCWSGDDQRLMTGSYNGFFRIFERGGAGAGAR
RGELTLEASRDAAARPRQPLRARRVAATAKRKKDEISVDCLDFNKKILHTAWHPHESIIA
VAATNNLFIFQDKF
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcgactacaactatggtggtgtcaccgttagccacgcaaccgactccaaagaacaaa
cgaagactatttgctgaagctagacagaacagcttacagaagctaagtgtgattttcgac
catggacataaaaacggcaatggtggggagacgacatggtgtttcagtcaggtgaaggga
accctggaggacgacgttaccgaggctgatcttatatcatgtgtcgagtttaaccacgat
ggcgagctgctggccaccggcgataagggcggcagagttgttatatttcagagggaccca
gcatcaaaacaatgtgttcctaagaagggcgagtataatgtttactcgacgttccaatca
cacgagcccgagtttgactacctcaaatcgttggagattgaggagaagatcaataagatt
agatggctcaagaggaagaaccaggcgcacttcttattgtcaaccaatgacaagactatt
aagttatggaaagtgtcggagcgtgacaagcgcgtgacgggctacaacacgcgcgaggag
ggcgggcggccgcgcgacccaacgcgcgtcacggcgctgcgcgtgcccaccgtgcgaccc
gccgacctcatggtcgaggcctcgcccaggcggatattcgcaaacgcacacacataccac
ataaactcgatctcactgaactcggaccaggagacgtacctgtcggcggacgatctgcgc
atcaacctgtggcacctcgaaataaccgaccagagcttcaatatcgtcgacattaagccc
gccaatatggaggaactaaccgaggttataacagcggcagagttccacccgactgaatgc
aatctctttgtatattctagtagtaagggtacgataaggctgtgcgacatgcgtgcggct
gcgctgtgcgaccggcacgcgaaactgttcgaggaaccggaagacccgcacgcgcgttcc
ttcttctccgagatcatatcctccatcagtgacgtcaagctcagcaactctggcagatat
atgatgtctagagattacttaggtttaaaagtatgggatcttagaatggaaacgaagcct
gtagaaacatatccagtacacgagtatcttcgctcaaagctttgctcgttgtacgagaac
gactgtatctttgataagtttgagtgctgctggagtggagacgaccagcggcttatgacc
ggttcttataatggattctttagaatattcgagcggggcggtgcgggcgcgggcgctcgg
cgcggcgagctcacgctggaggcgtcgcgcgacgcggccgcgcggccccgacagccgctg
cgagcgcgacgcgtcgccgccaccgccaagaggaagaaggatgaaataagcgtagactgc
ttggacttcaacaagaaaatcctccacacagcctggcatccgcacgagagtatcatagcc
gtagctgccacgaacaaccttttcatattccaagacaaattctag
DBGET
integrated database retrieval system
