Vanessa cardui (painted lady): 124540045
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Entry
124540045 CDS
T09161
Symbol
Fen1
Name
(RefSeq) flap structure-specific endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03030
DNA replication
vcd03410
Base excision repair
vcd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124540045 (Fen1)
03410 Base excision repair
124540045 (Fen1)
03450 Non-homologous end-joining
124540045 (Fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcd03032
]
124540045 (Fen1)
03400 DNA repair and recombination proteins [BR:
vcd03400
]
124540045 (Fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcd04147
]
124540045 (Fen1)
DNA replication proteins [BR:
vcd03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
124540045 (Fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
124540045 (Fen1)
DNA repair and recombination proteins [BR:
vcd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
124540045 (Fen1)
Exosome [BR:
vcd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124540045 (Fen1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
5_3_exonuc_N
XPG_I_2
HHH_5
Motif
Other DBs
NCBI-GeneID:
124540045
NCBI-ProteinID:
XP_046973403
LinkDB
All DBs
Position
24:7625716..7631283
Genome browser
AA seq
379 aa
AA seq
DB search
MGIIGLSKLIADIAPHAVKEMEIKNYFGRKVAIDASMSLYQFLIAVRSEGAQLTSVDGET
TSHLMGTFYRTIRLVENGIKPVYVFDGKPPEMKSHQLNKRAERREEAEKELQKATEAGDS
ASIEKFNRRLVKVTKQHGEEARELLKLMGVPVVEAPCEAEAQCAALVKAGKVYAVATEDM
DALTFGSNVLLRHLTFSEARKMPVQEFHLNQVLDGLELNHNEFIDLCILLGCDYCGSIRG
IGPKRAIELIKQHRSIEQVLHNIDTNKYQPPEDWNFEDARRLFLNPEVTEGKDIELKWSD
PDEEGLVKFLCGDKQFNEDRVRNGAKKLIKARTGSTQGRLDGFFKILSTTPNPKRKAEEQ
KKNVNKKAKTGSGRGRKPK
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgggtattattggtttatcgaaattaattgcagacattgcaccccacgctgttaaagaa
atggaaattaaaaattacttcggcagaaaagttgcaattgatgcgtctatgagcttgtat
cagttcttaatagcagtgcgcagtgaaggagcacaattgacatcggtggacggtgaaacc
acatcacatctaatgggaacattctatagaactatccgtctcgttgaaaatggtatcaaa
ccagtttatgtgtttgacggtaaaccgcctgaaatgaaatctcatcaactcaataaaaga
gcagagcggcgtgaagaggctgagaaagaacttcagaaagcaactgaggctggtgactca
gcatcaattgagaagtttaaccgtcgtctagtgaaggtgacaaaacagcatggtgaagaa
gcgagagagcttttgaaattgatgggagttcctgtggtcgaagccccgtgcgaagctgag
gctcaatgcgcagctttggtgaaggctggtaaagtctatgcagtggccacagaagatatg
gacgcattgaccttcggatcgaatgtgctcctacgacacttgaccttctcagaagccaga
aagatgcccgtgcaagagtttcacctgaatcaagttctagatggattggaacttaatcat
aatgagttcattgatctctgcattctcctcggctgtgattactgcggctccatccgaggt
atcggacccaaacgagccattgaactcatcaagcaacaccggagcatagagcaagtgttg
cacaacattgatactaacaaatatcaacccccggaggattggaatttcgaagacgcgagg
aggttattccttaacccggaagttacagaagggaaagacattgagttgaagtggtcggat
ccagacgaggagggtcttgttaagttcctgtgcggagacaaacagttcaatgaggatcga
gtccgcaacggtgccaagaagttgataaaggctcgcactggctccacgcagggcagactt
gatggcttcttcaagatattatcaacaacacccaacccgaaacgtaaagcagaagaacaa
aagaaaaatgtaaataagaaagcgaaaacaggcagtggcaggggcaggaaacccaagtag
DBGET
integrated database retrieval system
