KEGG   Vanessa cardui (painted lady): 124540277
Entry
124540277         CDS       T09161                                 
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
vcd  Vanessa cardui (painted lady)
Pathway
vcd03030  DNA replication
vcd03410  Base excision repair
vcd03420  Nucleotide excision repair
vcd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vcd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124540277
   03410 Base excision repair
    124540277
   03420 Nucleotide excision repair
    124540277
   03430 Mismatch repair
    124540277
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcd03032]
    124540277
   03400 DNA repair and recombination proteins [BR:vcd03400]
    124540277
Enzymes [BR:vcd01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     124540277
    6.5.1.6  DNA ligase (ATP or NAD+)
     124540277
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     124540277
DNA replication proteins [BR:vcd03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    124540277
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     124540277
DNA repair and recombination proteins [BR:vcd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     124540277
   NER (nucleotide excision repair)
    Other NER factors
     124540277
   MMR (mismatch excision repair)
    Other MMR factors
     124540277
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 124540277
NCBI-ProteinID: XP_046973702
LinkDB
Position
24:11062053..11069408
AA seq 896 aa
MNILKLINRCRLVISIPTQPLSRTLNNKTYKQIVERPNVYVNIPLRNMSQKSITSFFKST
PKKTEEKINKDDSISSLNNSSEVNGTSANENGKRSKRLRSSSSESKSPETEKKSPPVKSE
KKKKVKRQRIDSSESESESPTKPIEEQSDIKLERSNNPPKTYDSPKSKKSKKQENIVSEK
KIKVEKTSPKTPKKKEVKSKESPLNKFMVKVEKSEDSETKNNKENIKNDEEKPEVVAEID
YNPAKPKYHPIKDACWSKGEAVPYLALAKTLEVIEGTSARLKMVEILSNYFRSVIALTPE
DLLASIYLCLNKLAPAYHSLELGIAETYLMKAVGQCTGRTLAQMRSAAQRSGDLGLVAEQ
ARATQRTMFAAPKLLARRVLAALRDVAAMSGQASVNKKIGKIQSLYVACRHSEARYLIRS
LEGKLRVGLAEQSVLQALALACASTPPQAAGSQLDVASTMSPEAFKALVDEHALTIKTTY
CECPNYELIVPVLLRAGVAALPLHCKLTPGIPLKPMLAHPSRGVHEVFTRFENEEFTCEY
KYDGERAQIHVPGDAAPRFADAAVFSRNQENNTSKYPDVLRRLPALLQDSVTSCVLDCEA
VAYDTETKQILPFQVLSTRKRKDAAEGQIKVQVCVFVFDLLYLNGRALVRSALAERRALL
REHFREVPGQWQFAEGGDCSDEESVQRLLENAIQSSCEGLMLKALHGPRARYDIARRSHN
WLKLKKDYLEGVGDTIDAVVLGAYRGRGKRAGLYGGFLLGCRDADADHYQSLCKIGTGFS
DEDLRSLTDALAQHVIDAPRSYYMFDGAHAADVWFSAAAVWEVRCADLSLSPAHRAAIGL
VDPERGISLRFPRFVRVRDDKTPEQATSAEQLAQMYLAQDQVKNIAQKHVDQDDFY
NT seq 2691 nt   +upstreamnt  +downstreamnt
atgaatattttaaaattaataaatagatgtagattagttatatcaataccaactcaaccc
ttgtcaagaaccttaaataataaaacttacaaacaaatcgttgaaagaccaaatgtttat
gtaaatatacctctacggaacatgtctcaaaaaagtataacgtcgttttttaaatcgact
ccgaagaaaactgaagagaagatcaataaggatgattcaatatccagtttaaacaacagc
agtgaagtcaacggaacctctgcaaatgaaaatggaaagaggtcaaaaagactcagatca
agcagtagtgaaagtaagtcaccagagactgaaaaaaagtcacctcccgttaaatctgaa
aagaaaaagaaggtaaaaagacaaagaatagacagctcagagagtgaatctgaatcacca
acaaaacccattgaggagcagagcgatataaagctagagagaagtaacaatccccctaag
acatatgattcgccaaaatctaaaaagagtaaaaagcaagaaaatattgtctcagaaaag
aaaataaaggtagagaaaacatcaccaaagacacctaaaaaaaaagaagtgaagagtaaa
gagagtcccctgaacaagttcatggttaaagttgagaaatctgaggacagtgaaacaaag
aataacaaggaaaacattaaaaatgatgaagagaaaccagaagtagttgcagaaattgac
tacaacccagcaaaacccaagtaccaccccatcaaggatgcatgctggtccaagggcgaa
gcggttccatatctcgccctcgccaagactttagaggtcatcgagggcacatcggctcga
ttaaaaatggtggagatactgagcaactacttcaggtctgtgatagcactgactcccgag
gacctgctggccagcatatacctgtgcctgaataagctggcaccggcatatcacagcttg
gagttgggcatcgcggagacgtatctgatgaaggcggtggggcagtgcacgggccgcacg
ctggcgcagatgcgcagcgcggcgcagcgcagcggcgacctggggctcgtggccgagcag
gcgcgcgccacgcagcgcaccatgttcgccgcgcccaagctgctcgcgcgccgcgtgctc
gccgcgctgcgggacgtcgccgccatgagcgggcaagcatcagttaataagaaaattgga
aaaatccagtctttatatgttgcctgcaggcattcagaggcgcgatatctgatacggtcg
ctggagggcaagctgcgcgtggggctggcggagcagtccgtgctgcaggcgctggcgctc
gcctgcgcgagcacgccgccgcaggccgccggcagccagctcgacgtcgcctccacgatg
agcccggaggccttcaaggcgctggtggacgagcacgcgttgacgatcaagacgacgtac
tgcgagtgccccaactacgagctcatcgtgcccgtgctgctgcgcgccggcgtggccgcg
ctgccgctgcactgcaagctcacgcccggcatcccgctcaagcccatgctggcgcacccc
tcgcgcggcgtgcacgaggtcttcacgcggttcgagaacgaggagttcacgtgcgagtac
aagtacgacggcgagcgcgcgcagatccacgtgcccggggacgccgcgccgcgcttcgcc
gacgccgccgtgttcagccgcaaccaggagaacaacaccagcaagtacccggacgtgctg
cgccggctgccggcgctgctgcaggacagcgtgacgagctgcgtgctggactgcgaggcc
gtggcctacgacaccgagaccaagcagatactgccgttccaggtgctgtcgacgcgcaag
cgcaaggacgcggcggaggggcagatcaaggtgcaggtgtgcgtgttcgtgttcgacctg
ctctacctcaacggccgcgcgctcgtgcgcagcgcgctggccgagcgccgcgcgctgctg
cgggaacacttccgcgaggtgcccggtcagtggcagttcgcggagggcggcgactgcagc
gacgaggagtccgtgcagcgcctgctggagaacgccattcagtcctcctgcgagggactc
atgctcaaggccctccacgggccccgagcacgctacgatatcgcgcgccgctcgcacaac
tggcttaagctgaagaaggactacctggagggcgtcggcgacaccatcgacgcggtggtg
ctgggcgcgtaccgcgggcgcggcaagcgcgccggcctgtacggcggcttcctgctgggc
tgccgcgacgccgacgccgaccactaccagtcgctgtgcaagatcggcaccggcttctcc
gacgaggacctgcgctcgctcaccgacgcgctggcgcagcacgtcatcgacgcgccgcgg
agctactacatgttcgacggcgcgcacgcggcggacgtgtggttcagcgcggcggcggtg
tgggaggtgcgctgcgccgacctgtcgctgtcgcccgcgcaccgcgccgccatcggcctc
gtcgaccccgagcgcggcatttcgctgcgcttccccaggtttgtgcgcgttcgtgacgac
aagacgcccgagcaggcgaccagcgccgagcagctggcgcagatgtacctggcccaggac
caggtcaagaacatcgcgcagaagcacgtggaccaggacgacttctactaa

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