Vanessa cardui (painted lady): 124540556
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Entry
124540556 CDS
T09161
Name
(RefSeq) calsyntenin-1
KO
K22659
calsyntenin 1
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vcd04515
]
124540556
Cell adhesion molecules [BR:
vcd04515
]
Cadherins
Cadherin related
124540556
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
Glyco_hydro_16
Motif
Other DBs
NCBI-GeneID:
124540556
NCBI-ProteinID:
XP_046974186
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Position
25:complement(304699..508130)
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AA seq
947 aa
AA seq
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MIVRFLGILCFGVLVASAHNGEGNNDNEDIPYLELAEPDEGYHGLIRENETLVEVTPAIR
ARGPLCSFLILNNKHHGEAPFEIMVIDENEARLRVRYPLNCEKRRNYKFDIAAVGCDGSY
SNTVPVHITVTDVNEFAPVFSQAAYVRSVDEGKLYDELVRVEATDRDCTPRYGDVCKYEI
LNDGDRSQPFTIDNEGVIRNTEPLEYDKSHNHILSVTAYDCGMMQSAPVMVTIKVNKPCR
AGWKGLAERVDYAPGTGPLALFPAARLEACSSDERCPGVTRIQAAVTLQASRAGVACDRD
TYTLHSQRTICGLDSKTVDLLPSPGVGNEWAKSLKPDSGRDGEQMFEFDGESTSAIVPES
ILKHSLGSTFSVSTWMRHAPPPDHDKHRKEHVLCLADDHKMNRHHYALFVRNCRLILLLR
RDFGEGDLNIFRPAEWRWKLPEVCDNEWHHYAVNVRFPNVELFVDGEPYRSPDGKGPEVI
DDWPLHPAHGVNTTLVVGACWQGTESDMKHHLRGWLAGLGVVAGGVQAAPALRCAARCRE
GLSLAPDLYLRSVAVEGDGAAEVETLVRRVAYGDARSFPTPGRRNVHLATTITCDNGRVI
KARPAESYVMVLAPQTPTILLNGSSDAARDYAHFRAGLPVFPDLRVQVLARSGDNVREAE
SQKLDSCVVSVYPALNPDHEALSLRGAAPPAGVRAALTRDGVSLSGADSVRNYQQILREI
EYSNKKPAYYLNRVFKLTCSELNGRFTSNEYVQTLTVVHPRAAGDAHAQRPSGLADKLDV
ARDKPAAEAAAEALAPRAFAAHALRSSHAAELPAARLLDLHPRDRASSNVAVLMGAVCVG
AVVVLAALGVARARARPGRAARPRAPRAPHDGEMAWDDSALTITVNPMEETPARAAGPAP
ADSSDGESCSESDSEHNDSSDEDEEVVAGKQHKYRNISQLEWDNSTM
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgagatttttgggcattctgtgctttggagttttggtggcttcggcacacaac
ggcgagggaaacaacgacaatgaagacattccatatttagagctggctgaaccagacgaa
ggctatcatgggctgatccgggaaaacgagacgctagtggaggtgacgccggccatccgc
gcccggggcccgctctgctcgttcctcatcctgaacaacaagcaccatggagaagcgcca
tttgagataatggtgattgatgagaacgaggcgcgtctgcgcgtgcgctacccgctcaac
tgcgagaagcgacgcaactacaagttcgatatcgccgccgtaggctgcgacggttcctac
tctaacaccgtaccagtccacatcacggtgacggacgtgaacgagttcgcgcccgtgttc
agccaagcggcgtacgtgcgctccgtggacgagggcaagctgtacgacgagctcgttcgc
gtcgaggccacggaccgcgactgcaccccgcgctacggcgacgtctgcaaatacgagatc
ctcaacgacggcgatcgcagccagcccttcacgatcgacaatgagggtgtgatccgcaac
acggagccgctcgaatacgacaaatcacacaaccacatactgtcggtgacggcgtacgac
tgcggcatgatgcagtccgcgcccgtgatggtcaccatcaaggtcaacaaaccttgccgc
gccggatggaagggtctcgcggaacgcgtcgactacgcccccggcaccggccccctggcc
ctcttccctgcagcgagactagaggcctgctccagtgatgaaagatgccccggagtcact
cgtatccaggctgctgtgaccctgcaggcctctcgcgctggagtcgcctgtgaccgcgac
acttacaccctacattcacaacggactatatgtggtttggactcgaagacagtcgatctg
ctgccgagccccggcgtgggtaacgaatgggccaagtctctgaaacctgattcagggcga
gacggcgagcaaatgttcgaattcgacggcgaatcaacgtcagcaatcgtaccggagtcg
atcctgaagcattccctcgggagtaccttctcggtgtcgacgtggatgcgccacgcgccg
ccccccgaccacgacaagcacaggaaggagcatgtgctctgcttggctgatgatcacaaa
atgaaccgacaccactacgcgttattcgtacggaactgccgcctgattcttctcctgcgg
agggacttcggggagggagatctgaacatcttcagacccgccgaatggcgctggaagctt
cccgaggtatgcgacaacgagtggcaccactacgcagtgaacgtgcgcttcccgaacgtg
gaactgttcgtggacggcgagccctaccgctcgccggacggcaagggccccgaggtgatc
gacgactggcccctccacccggcgcacggcgtcaacaccaccctggtcgtgggggcatgc
tggcagggcacggagagcgacatgaagcaccacctgcgcggctggctggcggggctgggc
gtggtggcgggcggcgtgcaggcggcgccggcgctgcgctgcgcggcgcgctgccgggag
gggctgtcgctggcgcccgacctgtacctgcgctccgtggccgtggagggcgacggcgcc
gccgaggtggagacgctggtgcgccgcgtggcctacggcgacgcgcgctccttccccacg
cccggccgccgcaacgtgcacctcgccaccaccatcacctgcgacaacggccgcgtgatc
aaagctcgcccggcggagtcgtacgtgatggtgctggctccccagacgcccacgatcctg
ctgaacgggagctcggacgccgctcgcgactacgcccacttccgggccgggctgcccgtc
ttcccggacctgagggtgcaggtcctcgccagatctggagacaacgttagagaagcggag
agccagaagttggactcgtgcgtggtgtcggtgtacccggcgctcaaccccgaccacgag
gcgctgtcgctgcgcggcgcggcgccgcccgccggcgtgcgcgcggcgctcacgcgcgac
ggcgtcagcctgtccggcgccgactccgtgcgcaactaccagcagattctccgtgagatc
gagtacagcaacaagaagcccgcctactatctcaaccgcgtcttcaagctgacctgctcc
gagctcaacgggcgcttcaccagcaacgaatacgtgcagaccctgaccgtagtccacccg
cgcgccgccggggatgcgcacgcgcagcgaccctccggcctggcagacaaactggacgtc
gcgagagacaagccggcggcggaggcggcggccgaggcgctggcgccgcgcgcgttcgct
gcgcacgcgctgcgctcgtcgcacgcggccgagttgcccgccgcgcgcctgctcgacttg
cacccgcgcgaccgcgcctccagtaacgtggccgtgctgatgggcgccgtgtgcgtgggc
gccgtggtggtgctggcggcgctgggcgtggcgcgcgcgagggcccggccgggccgcgcg
gcgcgcccgcgggccccccgcgcgccgcacgacggcgagatggcgtgggacgactcggcg
ctcaccatcaccgtcaaccccatggaggagacgccggcgcgcgcggcgggcccggcgccg
gccgacagctcggacggcgagtcctgctccgagtccgactccgagcacaacgactcctcg
gacgaggacgaggaagtggtggcgggcaagcagcacaagtacaggaacatcagccagctg
gagtgggataacagcacgatgtaa
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