Vanessa cardui (painted lady): 124540721
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Entry
124540721 CDS
T09161
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124540721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcd03009
]
124540721
Ribosome biogenesis [BR:
vcd03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124540721
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp12
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_1st
ANAPC4_WD40
Beta-prop_WDR5
WD40_WDHD1_1st
WDR55
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_NOL10_N
WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_EML_2
Beta-prop_RIG_1st
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
124540721
NCBI-ProteinID:
XP_046974360
LinkDB
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Position
26:complement(1972655..1990504)
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AA seq
623 aa
AA seq
DB search
MAEAAFSKDGKYYSAITQDGRLRIWDTETNLLEQEYTPNLHLTSPPSCLQWISVTSTTSP
QKGRRKSVDVQETQCIALGTTSGKILLYSISQAKVETVLTDPKLKNKIQSLDWHRKYGLF
SCTNDNFVQEWDIESSTVRNKYNVNIASKNKQSNKVSAIRIVPHNQNTPAKYLIAASWQV
CLWRLHGNDSAVIKCLGHSAAPRALLTIAQLNKSCWLIEGSQTERLLSFWDVTITDEHLP
QTNGEEVTPSKRQRKLSLNAPVIPTPTYNFVLEDAPRIIDVEIKAEDGATKLNLAAATRS
GVVHYYGHMLNGASTKPIKPSNTIQVTTEDAQPLPLQCCKLPTTGDLLIGYNNGPSLLFE
KITPDLKSKTQVLIRGEAKVKSKVNQKKDVNKVRSEKGADVTYVEPMGGVSRKRITPGGK
VELSMEDRLANLTVDVKNRNKSAVSQNMTKLLMQGLHSNDKSVLLSVLQQDDARLATRTV
GALPPELVPRLLHQLADLAARKTSQCAASCTWLTAVLKCHSALVLATLNSKTSDHLTQLL
AIFTHRRSHLCQLLNLKGRLDLTISQRSSEDEIIEQQPVLEYNDTSSDEEVELEKYQSDS
DQMWEDDEVDGESQGSHSDRSDG
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggccgccttttcgaaggacgggaaatattattcagcaataactcaagacggt
agattgagaatatgggacacagaaactaatctcctggaacaggagtacacgccaaacctc
catttgacgtcgccaccatcatgtttacagtggatcagcgtcacatcaactacaagtcct
caaaaaggtcgaagaaaatctgtggatgttcaagaaacacaatgtatagcgttaggaaca
acaagcggaaagattcttttatattccataagccaagcaaaagtcgaaacggttttgacg
gatccgaaattaaagaataaaattcaaagtttagattggcataggaaatatggtttgttt
agttgtacgaatgacaacttcgtccaagaatgggacatagagagttcgaccgttagaaat
aagtacaatgttaatattgcaagtaagaataaacaaagtaacaaagtcagtgctataaga
atcgtacctcataaccagaacactccagccaaatatttaatagcggcatcatggcaagtt
tgtctatggaggttgcacgggaatgattctgcggttatcaaatgtctcggacacagcgca
gcacctcgagctctgctaactatagctcagttaaataaatcatgctggttgatagagggc
tctcaaactgaacgacttctatcattctgggacgtcacaataacagacgaacacttacct
caaacaaatggcgaagaagttacaccaagtaaaagacaaagaaagttatccctcaatgct
ccagtcatacccacaccgacgtacaactttgtactagaagatgcaccgagaattattgac
gttgaaataaaagcagaagatggtgctacgaagttaaatttagctgcagcgactaggagc
ggtgttgtacattattatggacatatgttaaatggggcatcaactaaaccaataaaacct
tccaatacaatacaagtgacaaccgaggatgcacaacctctgccgttgcagtgttgtaaa
ttgccaacgacaggagacttgctgataggatacaacaatggaccatcgttactcttcgag
aaaattactccagacttaaaatcaaaaactcaagtgttaataaggggtgaggcgaaagta
aaaagcaaagtgaaccagaagaaagatgtcaacaaggtacgctcggaaaagggggctgac
gtcacatacgtggaacccatggggggagtcagcagaaagagaatcacacctgggggcaag
gtggagttgtcgatggaagaccgccttgcaaacctaacagtggacgttaagaatagaaac
aagtcggcagtcagtcagaacatgactaaacttttgatgcagggattgcattcaaatgat
aaatccgtgctgctgtcagtgctgcaacaggatgacgcgcggctggcaacacgcacggtg
ggcgcgctgccgcccgagctggtaccgcgcctgctgcatcagctcgcagacctcgccgcc
cgcaagaccagccaatgtgctgcttcttgcacctggctaacagcagtattgaagtgtcac
tccgccttagtgctggccacgctcaactcgaaaacatcggaccacctcacacaattgctg
gcaatatttactcatagacgctcacacctttgtcaactgttgaaccttaagggacgtctg
gaccttacaatttcacaacgctccagcgaagacgaaattattgaacagcagcctgtactt
gagtataatgacacatcgtccgatgaggaagtggaactagagaagtatcaatcggacagt
gaccagatgtgggaagatgacgaggtggacggagagagccaaggcagtcacagtgacaga
tcggatggctga
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