Vanessa cardui (painted lady): 124541072
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Entry
124541072 CDS
T09161
Name
(RefSeq) CLIP-associating protein isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcd03036
]
124541072
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
vcd04812
]
124541072
Chromosome and associated proteins [BR:
vcd03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
124541072
Cytoskeleton proteins [BR:
vcd04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
124541072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
TOR1L1_N
Cnd1
HEAT
PDS5
HEAT_EZ
HEAT_2
TAN
Motif
Other DBs
NCBI-GeneID:
124541072
NCBI-ProteinID:
XP_046974845
LinkDB
All DBs
Position
27:complement(278348..337526)
Genome browser
AA seq
1458 aa
AA seq
DB search
MAHYPQPATLEAALPLLVRPDPRLRQQLGERLAALVRREEITHEIVGPLLDALIAWLNGG
NFKVAQSGLEVISALAERMGHEFSHYVPNVLPHIIDRLADTKEGVRVAARTCVAALSDSR
AVAPRALLARLAPALQHKAPHAREEALRCVAALLHEHGAAELQLRGAIPSLAALVADPNG
AVRDAAMQLLVDVYRHVGERLRQDLKKKELVPAQKLAILEQKFDEAREAGLLLPSATQGT
DEADFVSRTVKRTMTIPTSARSRDGDSSGASTPACEPPKRTVAGLYSLPSASRKPPPPTK
LTSSSGAPGGEAGAVSSEAFEAAFASSAPAAVYGARGLDDHCRHAAALLGDRAADWEKRV
DALRKIRSLLTANAHVQFPAEFAAHLKDLSVPFLVVIKDLRSQVVREACITIAHMAKVLK
NKLEQFSLYILQELINLIQNAAKVVSSAGTVCVRYIVTYVHAPRLVPVLATNLTTNKSKE
IRATLGEVLVLLLERWSPSSVEKQQAVMRDAIRRACADADGSARNYGRKAYWAYKRHFPE
DAEALFARLDAAAQKQIERERLGSLDSLHTIAAGRTITSPRSPSASVSERSPGGAARSVS
ALDAAAAQRARARALYSHLARSKVAAGTASLPRAKRSPVSAAVPPSPERVVGRSRSRPGV
SQSQPTSRSSSPSSRSGPVSLSGARRRPSGIPRSLAGSRETSPTRSGRSSSVAGAVSLRR
RDSAERPQRAPAATLRLLQQSRDAEAALRSPEDSSACEVRRDDDSEASSVCSERSLDSYR
RHDSVSWSGSGRLGWESSPPPPPPPDDIIALCACTHWTERKDGLTHLANYLNSGRLLTEE
QLRRLTELLNKMFVDAHTKVFSLLLDAVCELLLVHWQQLRDWLYQLMFRLLMKLGTDILG
SVQSKIMKTLDVIHECFPAELQLHNIFRFLADGATAPTAKTKVAALRFLADLAHDYCTPS
GLALALHGKRPPGRVGGVAREALRRVSAGGAAGAAGRALSKVAALAGDARAADVRHAARR
ALACLYDCNPVPFTALMSELPAETQALVNGVVQQHVRRTSSTGSDSPLRTSTTNANSNNA
EDVYSRIRKTTNEIHTYTAQHSNAECGNHTSSKDSGISQMSDAPRAPNGAAPHNGHADMI
GRAASADSSEEASSTKESSPTPHARLDYGHGDYSAGHLGRDKVKPFEVDENGLIITKSGL
RELEVLEALSTLDVSTAAPELLERLLLATHEVLKYGDCRRPQEYFKNIVRVSLAALSIEE
NAADKENADGANAQQPSGWGSARERAAAEAVKVLIWLCRRAETRAQWLEYFDLILLKLIN
AYGALSKEVMRAVDAGLPHVAAALPAAQVLALLRPVVRTRGHPTALCALKLAAEVAKARA
PELSDDAVAPLMEGVGQLADHQNSAVRKAAVFCMVAFTFALGEERMQPHLAHLSVSKYRL
LQVYISKQREEAARGAHS
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggctcactatcctcaaccagccacgctggaagcggcgctgccgctgctggtgcgcccc
gacccccgcctccggcagcagctcggcgagcggctcgcggcgctcgtccggcgcgaggag
atcacgcacgagatcgtgggccccttgctggacgcgctcatcgcctggctcaatggaggg
aactttaaggtggcgcagagcggactggaggtgatcagcgcgctcgcggagcggatggga
cacgagttctcacactacgtgccgaatgtgttgccgcatataatcgaccggctcgcggac
acgaaggagggcgtgcgcgtggcggcgcgcacgtgcgtggcggcgctgagcgacagccgc
gccgtggcgccgcgcgcgctgctggcgcgcctcgcgcccgcgctgcagcacaaggcgccg
cacgcgcgcgaggaggcgctgcgctgcgtcgccgcgctgctgcacgagcacggcgcggcc
gagctgcagctgcgcggcgccatcccgagcctggcggcgctggtggccgaccccaacggc
gccgtgcgcgacgccgccatgcagctgctggtcgacgtctacaggcacgtcggcgaacgt
ttgcgacaggatctgaagaagaaggagctggtgccggcccagaagctggccatactcgag
cagaagtttgacgaggcgagggaggcggggctgttgctgccctctgcgacccaaggcacg
gacgaagcggacttcgtgtcccggacggtgaaacgaacgatgacgatcccgacatccgcg
cgcagccgcgacggggacagcagcggcgcctccacgccagcgtgcgagccgccgaagcgg
acggtggcaggtctgtacagcttgccgtccgccagcaggaagccgcccccgcccaccaag
cttaccagctccagcggcgcgccgggcggcgaggcgggcgccgtgtcgagcgaggcgttc
gaggcggcgttcgcgagcagcgcgccggccgccgtgtacggcgcgcgcggcctcgacgac
cactgccgccacgccgccgcgctgctgggcgaccgcgccgccgactgggagaagcgcgtc
gacgccctgcgcaagatccgctcgctgctgacggccaacgcgcacgtgcagttcccggcc
gagttcgcggcgcacctcaaggacctctcggtgcccttcctggtggtcatcaaggatctc
aggagtcaggtggtccgcgaggcgtgcatcaccatcgcgcacatggccaaggtgctcaag
aacaagctggagcagttcagcctgtacatcctgcaggagctgatcaacctcatacagaac
gcagctaaggtggtgtcgtcggcgggcacggtgtgcgtgcgctacatcgtgacgtacgtg
cacgcgccgcgcctcgtgcccgtgctcgccaccaacctcaccaccaacaagagcaaggag
atccgcgccacgctcggagaggtgctggtgctgctgctggagcgctggagccccagcagc
gtggagaagcagcaggcggtcatgcgcgacgcgatcaggcgcgcctgcgccgacgctgac
ggatccgccagaaactacggacgcaaggcgtactgggcgtacaagcggcacttcccggag
gacgcggaggcgctgttcgcgcggctggacgcggccgcgcagaagcagatcgagcgcgag
cgcctcggcagcctcgacagcctgcacaccatcgccgccggcagaaccataacgagccca
cggagtccgtcggcgagtgtctcagagcgctcgccgggcggcgcggcgcgctcggtgtcg
gcgctggacgcggcggcggcgcagcgcgcgcgcgcgcgggcgctctactcgcacctggcg
cgctccaaggtcgccgccggaaccgccagcctgccccgagccaaaaggtcccccgtgagc
gcggccgtcccgccgagtcccgagagagtggtgggccgctctcggtcgcgcccgggcgtg
tcacaatcgcaaccgacatcccggtcgtcgtcgccgtcgtcccggagcgggcccgtgtcg
ctgtcgggcgcgcggcggcggccgtcgggcatcccgcgctcgctggccggctcgcgcgag
accagccccacgcgcagcggccgctccagcagcgtcgccggcgccgtcagcctgcgccgc
cgcgactccgccgagcgcccgcagcgcgcgcccgccgccacgctgcgcctgctgcagcag
agccgcgacgccgaggccgcgctgaggagcccggaggacagctcggcgtgcgaggtgcgg
cgcgacgacgactccgaggcgtccagcgtgtgctccgagcgcagcctggactcgtaccgc
agacatgacagcgtgtcgtggtcgggctcggggcggctgggctgggagagctcgccgccg
ccgccgccgccgcccgacgacatcatcgcgctgtgcgcctgcacgcactggaccgagcgc
aaggacggcctcacgcatctcgccaactacctgaacagcggtcgcttgctgacggaggag
cagctccggcgcctgacggagctgctcaacaagatgttcgtggacgcgcacacgaaggtg
ttctcgctgctgctggacgccgtctgcgaactgctgctcgtgcactggcagcagctgcgc
gactggctctaccagctcatgtttagattgctgatgaagctcggcacagacatcctcggt
tccgtgcagagcaagataatgaagacactcgacgtcatacacgaatgcttcccggccgaa
ctccaactgcacaacatatttaggttcctggcggacggcgcgacggccccgacggccaag
accaaggtggcggcgctgcggttcctggccgacctcgcgcacgactactgcacgcccagc
gggctggcgctcgcgctgcacggtaagcgcccgcccggccgagtggggggcgtggcgcgc
gaggctctaaggcgtgtgtcggcaggcggcgcggcgggcgcggcggggcgcgcgctgtcc
aaggtggcggcgctggcgggcgacgcgcgcgcggccgacgtgcgccacgccgcgcgccgc
gcgctcgcgtgcctctacgactgcaaccccgtgcccttcacagcgctgatgtcagagctg
ccggcggagacgcaggcgctcgtcaacggcgtcgtgcaacaacacgtgcgccgcacatcc
agcacgggcagcgacagtccactccggacgtcgaccacgaacgccaactccaacaacgcg
gaggatgtgtactcgcgcatccggaagaccaccaacgagatacacacctacaccgcgcag
cactccaacgcggagtgcggcaaccacacgtcgagcaaggactcgggcatcagccagatg
tcggacgcgccgcgcgcccccaacggcgccgcgccgcacaacggacacgccgacatgatc
ggtcgcgcggcgtcggccgacagctcggaggaggcgagcagtaccaaggagtcttcaccc
acgccccacgcccggctcgactacggtcacggtgactacagcgcagggcacctgggccgg
gacaaggtgaagcctttcgaggtggacgagaatggactgatcatcaccaagtcgggcttg
cgcgagctcgaggtgctggaggcgctgtcgacgctggacgtgtcgacggccgcgcccgag
ctgctggagcgcctgctgctcgccacgcacgaggtgctcaagtacggcgactgtcgccgt
ccgcaggagtacttcaagaacatcgtccgcgtgtcgctggcggcgctgtccatcgaggag
aacgcggccgacaaggagaacgccgacggcgccaacgcgcagcagccctccggctggggc
tcggcgcgcgagcgggcggcggcggaggccgtgaaggtgctcatctggctgtgccggcgc
gccgagacgcgcgcgcagtggctggagtacttcgacctgatcctgctgaagctgatcaac
gcgtacggcgcgctcagcaaggaggtgatgcgcgccgtggacgcggggctgccgcacgtg
gcggcggcgctgccggcggcgcaggtgctggcgctgctgcggcccgtggtgcgcacgcgc
ggccaccccacggcgctgtgcgcgctcaagctggccgccgaggtggccaaggcgcgcgcg
cccgagctcagcgacgacgccgtggcgccgctcatggagggcgtggggcagctggccgac
caccagaactcggccgtgcgcaaggcggccgtcttctgcatggtggccttcaccttcgcg
ctcggcgaggagcgcatgcagccgcacctcgcccacctctccgtcagcaagtaccgcctg
ctgcaggtctacatcagcaagcagcgcgaggaggcggccaggggcgcgcactcgtag
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