Vanessa cardui (painted lady): 124541081
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Entry
124541081 CDS
T09161
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03013
Nucleocytoplasmic transport
vcd03015
mRNA surveillance pathway
vcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124541081
09122 Translation
03013 Nucleocytoplasmic transport
124541081
03015 mRNA surveillance pathway
124541081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcd03019
]
124541081
03041 Spliceosome [BR:
vcd03041
]
124541081
Messenger RNA biogenesis [BR:
vcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124541081
Spliceosome [BR:
vcd03041
]
Complex C
Other components
EJC/TREX
124541081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
124541081
NCBI-ProteinID:
XP_046974861
LinkDB
All DBs
Position
27:4405054..4407538
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AA seq
166 aa
AA seq
DB search
MADVLDIENSEEFEVDEDGEQGIARLKEKARKRKGRGFGTESGGGGGSERGNRGRYDSLA
PEGDGNTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGY
ALVEYETYKQAASAREALDGADILGQAISVDWCFVKGPTKTHKKRR
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgttcttgatatcgagaattcagaagaattcgaagtcgatgaggatggtgaa
cagggaatcgcacgtttgaaggaaaaggcgcgaaaacgtaaaggtcgtggttttgggacc
gaatctggcggtggcggtggttctgaaagaggcaataggggaagatatgacagtcttgct
ccagaaggagatggtaacacacctggaccacaaaggtcggtggaaggttggatcctattt
gtgagcaatgtacacgaggaagcccaggaagaagatatacagaaccagttctcagagttt
ggagaaatcaaaaacatacatttgaacctggatcggcgcaccggtttccttaagggatac
gccttagttgaatatgaaacatacaaacaagcagctagcgctcgtgaggctctcgatgga
gctgatattcttggacaagcgatatcggtggactggtgcttcgtgaagggaccaactaaa
actcacaagaaacgacgatag
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