Vanessa cardui (painted lady): 124541581
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Entry
124541581 CDS
T09161
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124541581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcd03041
]
124541581
Spliceosome [BR:
vcd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124541581
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Tox-GHH
Motif
Other DBs
NCBI-GeneID:
124541581
NCBI-ProteinID:
XP_046975453
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All DBs
Position
28:629976..651802
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AA seq
711 aa
AA seq
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MAYQLSRREVEDLRSSLDRAIYRTIGKSDSSLLSTVSSCLTNGYERRKIIDKISSHIDSK
KASKLADKVIALAQELVSTSKTQKRKYDDKDKDKDSKRSRHDDRHESRDEKRDRDRDKDR
EDKEKKADNGMELPSILPDGETIGSKMAGLSADKIKVMMANAQKEIEERKRALLALKGEP
GGRNVSTAAAAAQQLKVQMQQNNAIPPPSVIKPVLYSKPGESAAQPITAEELEKQRKIAE
LQARIQRKLAGGALAAAGASGPAPLILDREGRTIDTSGKRVQLTHVAPTLKANIRAKRRE
EFRAQLSASGGDADDGARWHDARVRARAPARAKRALRFHEPGKFTQLAERLRMKAQLEKL
QNEISQIARKTGISSATKLALLAADVPDYDRVPDIEWWDSVILMTPEEREAKRQRSAAGD
GRSGSQRVEACNLGADDIVDNVNEDAITNLVEHPQQLRPPTEPLKPTYMPVFLTKKERKK
LRRQSRREAWKEEQEKVRLGLEAPPEPKLRISNLMRALGTEAVQDPTAIEAKVREQIAKR
QKTHLDANRARALTRDQKREKIDRKIREDTSMSVHVAVYRVKDLFECASAKFKVEVNAQQ
LHMTGCVLLHRGCCVVVVEGGPRQHAKYKRLMLHRIKWEEEMVKDADGQPTGNSCHLVWE
GATAKRAFGDIKFKVMPTEKQARELFSKHGVEHYWDLAYSGAVLGAGAEEP
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcttaccagttatcaaggagggaggttgaggatttacgctcttccctagaccgcgct
atttacaggactatagggaaatccgatagctccttactctccactgtgtcttcttgtctc
acaaatgggtatgagcgtcgcaagataatagacaagatatcatcacacatcgactcaaag
aaagcaagcaagctcgctgacaaagtaattgctctcgcccaagagctggtctccacgtct
aagacacagaagcggaaatatgacgacaaggataaggacaaggattcaaagagatcccgt
catgacgatagacatgaatcccgggacgagaaacgtgaccgggatcgagataaggatagg
gaggataaggagaagaaagcagataacggcatggagctaccctccatactccctgacggg
gagaccattgggtccaagatggccggtctgagtgctgataaaattaaggtgatgatggcg
aacgcccaaaaggagattgaggagcgcaaacgagcgctcctcgccctcaagggggagccc
ggggggaggaacgtgagcaccgcggcggcagcagctcagcagctgaaggtgcagatgcag
cagaacaacgcgataccgcccccgagcgtcatcaaaccggtcctgtactccaaacctggt
gagtccgccgcccaacccataactgctgaggagttggagaagcagagaaagatagcagaa
ctccaggccaggatacagaggaagctagcgggtggagccctggccgcggccggcgcgtcg
ggcccggcgccgctcatcctggaccgcgagggccgcaccatcgacaccagcgggaagagg
gtccagttgacgcacgtcgcgcccacgcttaaggccaacatccgcgcgaagcggcgcgag
gagttccgcgcgcagctgagcgcgtcgggcggcgacgcggacgacggcgcgcgctggcac
gacgcgcgcgtgcgcgcccgcgcgcccgcccgcgccaagcgcgcgctgcgcttccacgag
cccggcaagttcacgcagctcgccgagcgcctgcgcatgaaggcgcaactggagaagctc
cagaacgagatatcgcagatcgcgcgcaagacgggcatctcgtccgccaccaagctggcg
ctgctggccgccgacgtgcccgactacgaccgcgtgcccgacatcgagtggtgggacagc
gtgatcctgatgacgccggaggaacgcgaggcgaagcgccagcgctcggcggcgggcgac
gggcgctccggctcgcagcgcgtggaggcctgcaacctgggcgccgacgacatcgtcgac
aacgtcaacgaggacgccatcacaaacctcgtggagcacccgcagcagctcaggcctccc
acggaaccattaaaaccgacctacatgccagtcttcctcacgaaaaaggagaggaagaaa
ttgaggaggcaaagcaggagggaggcctggaaggaggaacaagagaaagttcgattggga
ctcgaggcgccgcctgaaccgaaattgaggatatcgaacctgatgagggcgttgggcacg
gaggcggtgcaggacccgaccgccatcgaggcgaaggtccgcgagcagatagcaaagcgc
cagaagacgcacctcgacgccaacagggcgcgcgcgctcaccagggaccagaagagagag
aagatagatagaaagatacgggaggacacgtcgatgagtgtccacgtggctgtctacagg
gttaaggacctgttcgagtgcgcgtctgccaagttcaaggtggaggtgaatgcccagcaa
ctgcacatgacgggttgcgtgctgctgcatcgcggatgctgcgtcgtggtcgtcgagggc
gggcccaggcagcacgccaagtacaagcgattgatgttgcatcgtatcaaatgggaggag
gagatggtcaaagatgctgacggtcaaccgaccgggaacagctgccacctcgtgtgggag
ggcgccaccgccaagagggcctttggggacatcaagttcaaggtgatgccgacagagaaa
caagcgagggaattgtttagtaagcacggcgtggagcactactgggacctcgcctacagc
ggagccgtgctcggcgccggcgcggaggagccctag
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