Vanessa cardui (painted lady): 124541674
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Entry
124541674 CDS
T09161
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vcd01009
]
124541674
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcd03019
]
124541674
Protein phosphatases and associated proteins [BR:
vcd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124541674
Messenger RNA biogenesis [BR:
vcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
124541674
mRNA cycle factors
Stress granule specific factors
124541674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Motif
Other DBs
NCBI-GeneID:
124541674
NCBI-ProteinID:
XP_046975594
LinkDB
All DBs
Position
1:complement(10457168..10468681)
Genome browser
AA seq
847 aa
AA seq
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MMHHPNMHHQPMSGHPPQHLPGHQGMPAHHQMPPHQMHRENRHVTLTRVPLGPSQPGGGM
GGHGQMGTMGAMPVPPHHAPAQRPPHTMRAMHHPPTQHHNVPPQQTRLRRPYSVGGGYGP
GGGPGVMPPPYAQPPPIPPPTTQQSHNGLCKPKSPILSTKTKLTSDFATPATPSTNVAPN
NTSDTKEDSSAVTTGGAGTVASVGGIGSGGAEGEGADAHAAEGEGEAARTSAAPANSKEK
TPMCLVNELARYNKIKHQYRLTSETGPAHKKVFTVTLRLGDTEEYTAEGSSIKRAQHAAA
RAALSGTRFLPLPPRAPPVAHHAHQAHHHRHAGAVMPTVELNALAMKLCQPAVYTSVPAV
PRPRPRLPYRLPAPFVPPYHPHAHAHAAHVPRLLEPTSLLYRVRVCVGGRSWVGEGATPQ
SARHDAAARALHELRPLSHADDNGDAGSDLLNSEVKSPVSLVHELALKRNLSVQFTVKSE
RGPPHMRVFVTACTVGEMETEGEGNGKKVSKRRAAERMLEEMRRRWPPALLRARPPADRR
RHAPTKKKPRNLIKEGGASTVAAAGAEGGGGGCAAAAGAGGAAGGAGGGADNPISRLAVV
RHAARARSPQYRVLEERGAARRREFLVQCDAPPHCATGLGPNKKTAKRRAAHNVLLAMEL
SASTGEQTAANTNTAESITNGTGETGKSNNVDVKRKDSETNAGGANSDVRQPVPGVLMMD
YHQRSGQPSQPNGVSETSATGGTSAAASTPGAKDQLMYLSQLLGFTVQFSDFPKRNHGEY
LSLVSLSTEPPVMCHGGGASTAHSHEQCARAALRALAHMGLDAPTTGMQSLPAAGAAKPA
VISNGIE
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgatgcatcacccgaacatgcatcatcagccaatgtccgggcatccgccgcagcacctg
ccgggccaccagggtatgcctgcgcatcaccaaatgccgccgcatcagatgcatagggag
aacaggcacgtaacactaactagagttccgttgggtccgtcgcaacccggcggcggcatg
ggcgggcatggacagatgggcacgatgggcgcgatgcctgtcccgccgcaccatgcgccc
gcgcagagaccgcctcacacgatgagagccatgcaccacccgccaacacagcaccacaac
gttccaccacaacagactcgtctccgtcgcccttactccgtcggcggcggatacggcccc
ggcggcggacccggcgtcatgccgccgccctacgcgcagccaccacccataccaccaccc
actacacaacagagtcataatggtctgtgcaagccaaaatcaccgattttgtcaacaaaa
acaaaactaacctctgactttgcaactccagcaaccccgagcacaaacgtggcacccaat
aacacgagcgacacgaaggaggacagcagtgcagtcactaccggcggtgcggggaccgtg
gcgagtgtgggggggatcggctcgggcggcgcggaaggggagggcgccgacgcgcacgcg
gcagagggcgagggcgaggcggcccgcacgtctgccgcgccggccaacagtaaagagaag
acacccatgtgcctggtcaacgaactggccaggtacaataagattaagcatcaatatcgc
ctcacgtcagaaacaggacccgctcacaaaaaagtattcacagtaacactccgactgggt
gatactgaagaatatacagctgaggggtcgtccattaagcgcgcacagcacgcagcggca
cgggcagcgctgagtgggacgcgcttcctgcctctgccgccgcgggcgccgcccgtggcg
catcacgcgcaccaagcgcaccaccatagacacgcgggtgcggtgatgccgactgtagag
ttgaacgcgctagctatgaaattgtgccaaccggcggtgtacacgtcggtgccggccgtg
ccccggccgcgaccccgtcttccataccggctgccggcgcccttcgtgccgccctaccac
ccgcacgcacatgcgcacgccgcacacgtgccccgccttctcgaaccgacttcgcttctc
tacagagtgcgagtgtgcgtgggcgggcgctcgtgggtgggcgagggcgccacgcctcag
agtgcgcggcacgacgcggcggcgcgcgcactgcacgagctgcggccgctctcgcacgcc
gacgacaacggcgatgcaggttcagacttgcttaattcagaagtgaagtctccagtgtca
ttggtacatgagctggcgctaaagaggaatctctcagttcagtttaccgttaaatctgaa
cgtggacctccacatatgagggtgtttgttacggcgtgcacggtgggcgagatggagacg
gagggcgagggcaacggcaagaaggtgtccaagcggcgcgcggccgagcgcatgctggag
gagatgcgccggcgctggccgcccgcgctgctccgggcgcgcccgccggccgaccgccgc
aggcatgcgcctactaagaagaagcccaggaacctcatcaaggaagggggagcgagcacg
gtggcagccgcgggtgcggagggcgggggcggcgggtgcgcggcggcggcgggcgcgggc
ggcgcggcgggcggcgcgggcggcggcgccgacaaccccatctcgcgtctggccgtggtg
cggcacgcggcgcgcgcgcgctcgccgcagtaccgcgtgctggaggagcgcggcgcggcg
cggcgccgggagtttctcgtgcagtgcgacgcgccgccgcactgcgccacaggcctcggg
cccaacaagaagaccgccaagcgacgcgccgcgcacaatgtgcttctagcgatggagttg
agtgccagcacgggtgaacagacggcagcaaacacgaataccgcggaatcgattaccaac
ggcactggcgagacaggcaaatcaaacaacgtcgatgtcaaacgaaaggacagcgagact
aatgcaggtggtgcaaacagtgatgtacgtcaaccagtacccggagttcttatgatggac
tatcaccaacgatctggtcaaccctcacagccaaatggtgtgagcgagacgagcgctacg
ggcggcacgagtgcggcggccagcacgccgggcgcgaaggaccaactcatgtatttgtca
cagctacttgggttcaccgtgcagttctccgatttccccaagcgcaatcacggcgagtac
ctgtcgctggtgtcgctgtcgacggagccgcccgtcatgtgccacggcggcggcgcgtcc
acggcgcactcgcacgagcagtgcgcgcgcgccgcgctgcgggcgctggcgcacatgggg
ctggacgcgcccaccaccggcatgcagagcctgccggccgccggcgccgccaagccggcc
gtcatcagcaacggcatcgagtga
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