Vanessa cardui (painted lady): 124541733
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Entry
124541733 CDS
T09161
Name
(RefSeq) transcription elongation regulator 1 isoform X1
KO
K12824
transcription elongation regulator 1
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124541733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcd03041
]
124541733
Spliceosome [BR:
vcd03041
]
Complex A
U1 snRNP components
U1 related factors
124541733
Complex B
124541733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
124541733
NCBI-ProteinID:
XP_046975627
EnsemblRapid:
ENSVCAG00000002270
LinkDB
All DBs
Position
28:complement(463328..496366)
Genome browser
AA seq
1164 aa
AA seq
DB search
MEDEYMNTQDSGMNDVINRSSEGNDSISEASKDFVDPANYDDSFEDEDGGNSFRGGRGGR
GNFRGRGRGPPPGWMNGPPPPMRFRGRGYGPGGPPMRGRGFFRGRGGPRFGPNNGPNFDN
NWGPMGPPPPGMMGGPPPFGPPPGMMPPGGPMGPPPNMMGQPPPFGPPGMPPPNMPAPEL
WVETKSEEGKSYYYHARTRETTWTRPQEGPTCKVITQAEMESMAVTGQMPGMGGQSMPMN
GPMGGPPMGGPPMGMMNGMMGMMPPGVGPAPGAVPPFMTQPPPWVKDNNNQMSTPKSQDK
QDSSPEDEAPPGDSAPSQSPAQTPTQPPGGAWGGWGWAPPLVGQPPGLAAAAVPDKGAAT
QLPQMGAPLAGSEAPSEQAAAPPKKEETAVPASLQALAAEWSSHRAPDGRPYYYHAATQH
SVWEKPPPLRDLEELQAKIAIEKADKSEKKSDRIDLDDSKIEVIDVEAHAEAQAAAEAAA
ERERADRERDELERRERERAERERAERERADKEKAKTDKSRPVSSTPISGTPWCVVWTGD
GRVFFYNPTARLSVWERPAQLAGRPDVDQAVSQPPHGKEAAAKEKVATTPAKNANGELKR
NAESESSDSEAEPAKKAKPEESGAGAAGAAGAAGEAPRRRALQIDAGAEAAMEAESRAAR
ERAVVPFEQRVRAFLQMLHESDVSAFSPWEKELHKIVFDSRYLLLDSKERKQVFDKYVRE
RAEEERKEKKNRLQQKKQAFRLLMEEAKLHSKSSFMDFSSKYSRDERFKNIEKMRDREAY
FNDYIAEVRKKEKEDKDRKREQAKTEFIALLKEKAVDRHARWVDVKKKIDSDSRYKAVES
SSMREDYFREYCKIVKEERKKEKDGKEKERERGSKKDKKDKERDKDKDREKDSKKDKKKE
KAGDEPVAEASEAEEAEPEETESEAAKEREARAQASIKERERQVQRALATSLRDRDKERE
YHKRDEAVQHFNALLADLVRNPDLTWREAKKQLKKDHRYGLAEELNKDDKERLFSQHVGA
LAGRRRDKLRALLGELGVGCTAHWRDVRKQLADHAAAPAYRSAPQMEREFRDYQRDKQSA
AKAALRQLLLETRSITHRSLAAVRDAPAALPLLHDTLRHDARYAALDHVADERQQIIMGY
LEELEKKGPPPPPTATEPSRRAKQ
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaatatatgaatacacaggactcgggtatgaacgatgttattaatcgcagt
agtgaaggaaacgatagtataagtgaagcatccaaagatttcgttgatccagccaattat
gatgatagttttgaagatgaagacggcggtaacagttttcgaggtggtcgaggaggacga
ggaaattttaggggacgaggccgtggcccacctccaggatggatgaacggtcctccacca
ccgatgcgtttccgcggcaggggctacggccctggcggcccaccaatgagaggtcgaggc
tttttccggggccgcggtggacctcgctttggaccaaacaatggaccaaattttgataac
aactggggccctatgggtcctccgcctccgggtatgatgggtggtccgccaccgttcggt
ccgccacccggtatgatgccacctggaggtcctatgggtcccccgccgaatatgatgggt
cagcctccaccatttggaccaccaggaatgccaccaccaaatatgccagcgccggaactc
tgggtggagacaaagtcagaggaggggaaatcgtactactaccacgcgaggactcgtgag
acgacctggacgaggccccaagaggggcccacctgtaaggtcatcacgcaggccgagatg
gaatccatggctgttacagggcaaatgccaggtatgggtggacaatcaatgccaatgaat
ggaccgatgggtggcccaccgatgggaggtccccccatgggcatgatgaacggtatgatg
ggcatgatgccgcccggcgtgggtccggcgccgggagccgtgccgcccttcatgacacaa
ccgcctccatgggttaaagacaacaacaatcaaatgtccacaccgaagtcacaggacaag
caggacagctccccagaagacgaggcgcctccaggggactctgctccctcgcagtctccc
gctcagacccctacacagccaccaggcggcgcgtggggcggctggggctgggcgccgccg
ctggtggggcagccgcccggcctggccgccgccgccgtgcccgacaagggcgcagccaca
cagctaccacaaatgggcgctccgttggccggcagcgaagcaccctccgagcaagctgcg
gcaccgcctaagaaggaggaaactgccgtgcccgcgtcgctgcaggcgctggcggccgag
tggagctcgcaccgcgcgcccgacggccgcccctactactaccacgccgccacgcagcac
agcgtctgggagaagccgccgccgctgcgcgacctcgaggagttgcaagctaaaatagct
atagagaaggcggacaagtccgagaagaagtcggacaggatagacctcgacgacagtaaa
attgaagtgatagacgtggaggcgcacgcggaggcgcaggcggcggccgaggcggcggcg
gagcgcgagcgcgccgaccgcgagcgcgacgagctggagcgccgcgagcgcgagcgcgcc
gagcgggagcgcgccgagcgcgagcgcgccgacaaggagaaggccaagaccgacaagagc
cgccccgtctccagcacgcccatctccggcacgccctggtgcgtggtgtggacgggcgac
ggtcgcgtgttcttctacaacccgacggcgcgcctgtcggtgtgggagcgtccggcgcag
ctggcgggccgccccgacgtcgaccaagccgtgtcgcagccgccgcacggcaaggaagcc
gcggctaaagagaaagtagcaacgacgccggcaaagaatgcaaatggagagttaaagaga
aacgcggagtccgaatcctcagactccgaagcggagcccgctaagaaagccaaaccggaa
gagagcggcgcgggggcggcgggcgcggcgggcgcggcgggcgaggcgccgcggcggcgc
gcgctgcagatcgacgcgggcgcggaggcggccatggaggcggagtcgcgcgcggcccgc
gagcgcgccgtggtgccgttcgagcagcgcgtgcgcgccttcctgcagatgctgcacgag
agcgacgtgtccgccttctcgccctgggagaaggagctgcacaagatcgtcttcgacagc
cgctacctgctgctcgactccaaggagcgcaagcaggtgtttgacaaatacgtccgcgaa
cgtgctgaggaagagaggaaggagaagaaaaacaggttgcaacagaagaaacaggcgttc
aggctgctcatggaggaggccaagctgcattccaaatcgtcgttcatggacttttcgagc
aagtacagtcgcgacgagcgtttcaagaatatcgagaagatgcgcgacagggaggcgtac
ttcaacgactacatcgcggaggtcaggaagaaggagaaggaggacaaggacaggaagagg
gaacaggccaagacggagttcatagcgctcctcaaggagaaggcggtcgatcgccacgcg
cgctgggtcgacgtcaagaagaaaatcgactcggactcgcgatacaaggccgtcgagagt
agctcgatgagggaggattactttagggagtactgtaagatcgttaaggaggagaggaag
aaggagaaggacggaaaggagaaagagcgcgagcgaggcagcaaaaaagacaaaaaggac
aaagagcgagacaaggataaggacagagagaaggacagcaagaaggataagaagaaggag
aaggccggtgacgagccggtagcggaggcgtcggaggcggaagaggcggaacccgaggag
acggagagcgaggcggccaaggagcgcgaggcgcgcgcgcaggcttccatcaaggagcgc
gagcggcaggtgcagcgcgcgctcgccaccagcctgcgcgaccgcgacaaggagcgcgag
taccacaagcgcgacgaggccgtgcagcacttcaacgctctcctggctgacctggtacgg
aaccccgacttgacgtggcgcgaagccaagaaacaactgaagaaggaccatcgatacggc
ctcgctgaggaactcaacaaagacgataaggagcggctgttcagccagcacgtgggcgcg
ctggcgggccggcggcgcgacaagctgcgcgcgctgctgggcgagctgggcgtgggctgc
acggcgcactggcgcgacgtgcgcaagcagctcgccgaccacgccgccgcgcccgcctac
cgcagcgcgccgcagatggagcgcgagttccgcgactaccagcgcgacaagcagagcgcg
gccaaggcggcgctccgccagctcttgctcgagacgcgctccatcacgcaccgctcgctc
gccgccgtgcgcgacgcgcccgccgcgctgccgctgctgcacgacacgctccggcacgac
gccaggtacgcggcgctcgaccacgtcgcggacgagcgccagcagatcatcatgggctac
ctcgaggagttggagaagaagggccccccgccgccgcccacggccacggagccctcgcgc
cgcgccaagcagtga
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