Vanessa cardui (painted lady): 124541864
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Entry
124541864 CDS
T09161
Name
(RefSeq) zinc finger protein swm-like
KO
K13192
RNA-binding protein 26
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vcd01009
]
124541864
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcd03019
]
124541864
03041 Spliceosome [BR:
vcd03041
]
124541864
Protein phosphatases and associated proteins [BR:
vcd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124541864
Messenger RNA biogenesis [BR:
vcd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
124541864
Spliceosome [BR:
vcd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124541864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
zf-CCCH
Nup35_RRM_2
Herpes_UL47
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
124541864
NCBI-ProteinID:
XP_046975729
LinkDB
All DBs
Position
29:complement(6540753..6558148)
Genome browser
AA seq
446 aa
AA seq
DB search
MFASRDRSMSPPGARLDHADAYRRRCRDFDVKGYCMRGDLCEWDHGADPVVLEDAALSRV
LALPPPLAVPVPGPCGEYNPAAPDIWAAGVVGYAPPAHPPPRLAPRELVPIPRVRHEAPA
PPPPRHAPGKKGFEYNRLANAANCSLEVKKVPPGLNEIKHLDSHFSKFGKIVNIQVCYEG
DHEAALITFSTPTEANVAYKSTEAVLNNRFIKVFWHNPENKQENTAPGGQKANKQTDRQN
HLMSHNKVLINRDNIKATADVKQAEKAKETGNGTTAVVGRPAGKAGAGGLQMVEAHRRGH
RLLQTQLRHQQLLIQSLESGNVTEQHKAVLMKTINTMQEGIEKLRKELVANQGILKQMQD
ESVSRSMSRLQLDQMNAKKPKTLQEVQKDILDAELDIITKQQEGQDVSELAKNIAEMRRQ
MALQFPTFSGRIRTHSSYRIVKRKLR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcatcacgtgaccgctcgatgtcgccgcccggcgcgcgcctggaccacgctgac
gcctaccggcgccgctgtcgagactttgacgtgaagggctactgcatgcgcggcgacctg
tgcgagtgggaccacggcgccgaccccgtcgtgctcgaggacgcggctctgtcgcgcgtg
ctggcgctgccgccgccgctggccgtgcccgtgcccggcccgtgcggcgagtacaacccc
gccgcgccggacatctgggccgccggcgtggtgggctacgcgccgcccgcgcacccgccg
ccgcgcctcgcgccgcgcgagctcgtgcccatcccccgggtgcgccacgaagcgcccgcg
ccgccgcccccgcgccacgcccccgggaagaagggcttcgaatacaaccgcctcgctaac
gcggcgaattgttcgctggaggtaaagaaggtaccgccgggcctcaacgagatcaaacac
ttggacagtcatttcagcaagttcgggaagattgttaatatacaggtctgctacgagggt
gaccacgaagcggctctcataacgttctcaacgccgacggaagcgaacgtcgcctacaag
agcactgaggccgtgctcaacaacagattcattaaagtcttctggcacaaccctgagaac
aaacaagagaacacagcgcccggtggtcagaaggcgaacaagcagacggaccgacagaat
catctcatgtcccacaataaggtgttaatcaacagagacaacatcaaagccaccgccgac
gtgaaacaagctgagaaggcgaaggagactggcaacggtaccactgcggtggtcggcagg
ccggcgggcaaggcgggcgccggtggcttgcagatggtggaggctcaccgccgcgggcac
aggctgctgcagacccagctgcggcaccagcagctgctcatacagagtctcgagtcagga
aacgtgacggaacaacacaaagcggttctgatgaagacgataaacacgatgcaggagggc
atcgagaagttgaggaaggagctcgtcgccaaccaggggatcttgaagcagatgcaggac
gaatcagtgtcaagatcgatgtctcggctgcaactcgatcagatgaacgcgaaaaaaccg
aaaactctacaggaagtacaaaaagatatattggatgctgaattagatattataacgaaa
caacaggagggtcaagatgtatccgagttggccaagaacatagcggagatgagacgacag
atggcgctgcagttcccgacgttttccggaagaataaggacgcactcgagctaccgtatc
gtgaagagaaaacttaggtaa
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