Vanessa cardui (painted lady): 124542484
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Entry
124542484 CDS
T09161
Symbol
garnet
Name
(RefSeq) adaptor-related protein complex 3, delta 1 subunit-like garnet isoform X1
KO
K12396
AP-3 complex subunit delta
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
124542484 (garnet)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcd04131
]
124542484 (garnet)
Membrane trafficking [BR:
vcd04131
]
Endosome - Lysosome transport
Others
AP-3 complex
124542484 (garnet)
Endosome - Golgi transport
124542484 (garnet)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
AP3D1
Cnd1
INTS1_R4
HEAT_2
HEAT
PDS5
JAB
Motif
Other DBs
NCBI-GeneID:
124542484
NCBI-ProteinID:
XP_046976385
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All DBs
Position
2:8028958..8041143
Genome browser
AA seq
985 aa
AA seq
DB search
MALKKVKGNFERMFDKNLTDLVRGIRNNKDNEAKYIAQCMEEIKVELRQDNIGVKANAVA
KLTYLQMLGYDISWAIFNIIEVMSSNKFTFKRIGYLAASQSFHADSELLMLTTNMIRKDL
NAQNQYEAGLALSGLSCFISHDLARDLANDIMTLMSSTKPYLRMKAVLMMYKVFLRYPEA
LRPAFPKLKEKLEDPDPGVQSAAVNVVCELARKNPKNYLSLAPVFFKLMTTSTNNWMLIK
IIKLFGALTPLEPRLGKKLIEPLTNLIHSTTAMSLLYECINTVIAVLISISSGMPGHAAS
VQLCVQKLRILIEDSDQNLKYLGLLAMSRILKSHPKSVQAHKDLVLACLDDKDESIRLRA
LGLLYGMVSKKNLMEIVKKLMVHMERAEGTLYRDELLTRMIEICSQNNYQHVVDFEWYIT
VLAELTEMETSAKHGCMIAAQLTEVGARVAQTRGFAARECAALCARAAASPPRAASREVL
YAAAYVLSEYCTEEDVMRESISALTLCASADAGGPHMRARAVCVHAALKLAAKLLRAFEL
RGDRRSVIAVLHEILAGVRPLLCSEDMEVQERAHNTTALMALLLRRLQPDDPALADHTLV
DHEHSNGLGKNENGEINEEESSKSLSGGLIEEIVSLFEGELKPVAPKAQKKVPIPADLDL
NQWLSRDRWSSDSSSSEGEEEGTALFTAPQVDSKPVTQFTPEELQMLREARRQEQANNPH
YLKDDSPRSYQQDDIPVAEIALEVPLQVQSKRSDKYLITRENSKKAKKEKRPSKKRKNKI
ERHSSESDSDDGADRVGRPAVAEGGELPDGAAPSDDEQSLHDDPHRALDLDLDLPLREEE
LLSSRIQQYPLPESGLLIKKKESKKNKSSEKRSSEKSSHKKKVKNSKRNKEIDLMLPEIA
NNNDLGDNLLIETGEDNAPKDDLTIDDASDKKQREKLKTEKHKKSKKEVKDKDSKKKKTS
KKDKHETKIGYEEALGISTPSKEVI
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggctttgaaaaaggttaagggcaactttgaaagaatgtttgataaaaatctcaccgat
ttagttcgtgggatcagaaataacaaagataatgaggcaaaatatatagcgcaatgtatg
gaagaaataaaagtagagttgcgacaagacaatatcggagtgaaagctaacgctgtcgca
aaactaacatatctacaaatgttaggatatgatatatcatgggcgatatttaatataata
gaagtgatgagttctaacaaatttacatttaaacgcattggatacttagcagctagtcaa
tcatttcacgcagattctgaattgcttatgctcaccacaaacatgataagaaaagatctg
aatgctcaaaatcaatatgaagctgggctggcactcagtggccttagttgtttcatatcc
catgatttagcaagagacttagccaatgacattatgactctgatgagctcaactaagcca
tacctccgaatgaaagctgttctaatgatgtacaaggtatttttaagatatcctgaagcc
ttaagaccagctttccctaaattaaaagaaaaattagaagatccagatcctggagtccaa
tcagcagcggttaatgttgtctgtgaattggcaagaaagaaccccaaaaactacctgtcc
ttagctccggtattcttcaaattaatgacaacatcaacaaataattggatgttgattaaa
atcatcaaactgtttggtgccttaaccccattagagccccgacttggcaagaaactgata
gaaccattaactaatttaattcatagtacgacagccatgtcgcttctgtacgagtgcatc
aacacggtgatagcggttctcatcagcatcagcagcggcatgccgggacacgccgcctct
gtgcagctgtgtgtgcagaaactaagaatactcattgaagacagcgaccaaaacttaaag
tatctggggctgctagcgatgtcccgaatactcaaatctcatccgaagtccgtgcaagct
cacaaagacctcgtgctggcgtgcctggacgataaagacgaatctattagactcagagcg
ttgggtctactgtacggaatggtttccaaaaaaaatttgatggagatagtcaagaagctg
atggtgcacatggagcgcgccgagggcacgctgtaccgcgacgagttgctcacgcgcatg
atcgagatctgctcgcagaacaactaccagcacgtcgtcgacttcgagtggtacatcacc
gtgctggccgagctcaccgagatggagaccagcgccaagcacggctgcatgatcgcggcg
cagttgacggaggtgggcgcgcgcgtggcgcagacgcgcgggttcgcggcgcgcgagtgt
gcggcgctgtgcgcgcgcgcagccgcctcgccgccgcgcgccgcctcgcgggaggtgctc
tacgccgccgcctacgtgctcagcgagtactgcaccgaggaggacgtgatgcgcgagtcg
atatcggcgctgacgctgtgcgcgagcgcggacgcgggcgggccgcacatgcgcgcgcgc
gccgtgtgcgtgcacgccgcgctcaagctggccgccaagctgctgcgcgccttcgagctg
cgtggcgaccgacgctccgtcatcgcggtattgcacgaaatcctggcgggcgtgcgtccg
ctgctgtgcagcgaggacatggaggtgcaggagcgcgcgcacaacacgacggcgctcatg
gcgctgctgctgcgacgcctgcagcccgacgaccccgcgctggccgaccacacgctcgtc
gaccacgaacacagcaatggactaggaaaaaatgaaaatggtgaaattaatgaagaagaa
tccagtaaaagtttaagtggtggacttattgaagaaattgtgagcctgttcgaaggggaa
ctcaaaccagtagcacctaaggcacagaaaaaagtaccaataccagctgacttagatctg
aaccagtggttgtcacgtgaccgctggtcgtccgacagctccagctcggagggtgaggag
gaaggcacggcgcttttcacggcgccgcaagtcgactccaaacccgtcacgcagttcact
cctgaggagttgcaaatgttgcgtgaggcgcgcagacaagagcaggccaacaatccgcac
tacctgaaggacgactcgccgcgatcctaccagcaggatgacatacccgttgcagagatt
gcgctagaggtgcctctccaagtgcaatcaaagagatctgataagtacttaattacaaga
gaaaattcgaagaaagctaaaaaggaaaagcggccgtcgaagaaacgaaagaataagata
gaaagacattcctcagaatctgatagtgatgatggcgcagaccgcgtggggcggccggcg
gtggcggagggcggcgagctgcccgacggcgcggcgccctccgacgacgagcagtcgctg
cacgacgacccgcaccgcgcgctcgacctcgatctcgacctgcctttgcgtgaagaagaa
ttgctatcatctaggatacagcagtatcctttaccagagagcggcttattgattaagaag
aaagaatccaaaaagaataaatcttcagagaagagatcatcagaaaaatcttcccataag
aagaaagtaaaaaattctaagcgtaataaggaaatagacttaatgttacctgaaattgcg
aataataatgatctaggagacaatttactcatagaaactggggaagacaatgcgcctaaa
gacgatctaacaatcgacgatgcctctgataaaaaacaacgggagaaacttaagactgaa
aaacacaagaagtcaaagaaagaagtaaaagacaaggattctaagaaaaagaaaacttct
aaaaaagataaacacgaaactaaaattggatatgaagaagctttaggtatttccacgcct
agcaaagaagttatttag
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